Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2385 ATGCTTCTATCCGTTCATACCCAAGACATTAAACTCTCCCATCTTTTCTCTCTCTTCATAATTTTTCCATGTAACTGTTTGATTAGGTACAGCATTAATGCTTCAAATCTACATAACAACATGGAGATTGAAGCAGCAAGTGGTAGCAACAACAAAGGATACAACATGGATGAGAGTGATGAGGAAGCATATTGTGGCCTTAATAGAGGAAGTTTCTTAGCATGGGAAGATCTAAGAGTTATGTTGCCAAATTTTGGGAAAGGACCAACCAAGAGGTTACTTAATGGGTTAAATGGTTTTGCTGAGCCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACTTTGCTTGATACACTTGCAGGTAGACTTGCAAAAAATGTGGTAATGACAGGAAATGTTTTTCTCAATGGGAAGAAAAAAACTCCAGGCTATGGTTTTGTTGCATACGTAACACAAGAAGATGTGTTGTTAGGAACTCTTACAGTGAAAGAAACAATAACATATTCAGCACATTTACGTCTTCCATCAACAATGTCCAAAGAAGAAATCAACGGCTTAGTTGATGCAACAATCATTGAAATGGGTCTCCATGACTGTGCAGATAGGTTAATAGGTAACTGGCATTTGAGAGGTATAAGTGGTGGCGAAAGGAAAAGAACTAGCATTGCACTTGAGATTCTCACAAGGCCTCGGTTGCTGTTTCTTGATGAACCGACTAGTGGTTTGGACAGTGCTTCTGCATTTTTTGTTGTCCAAACTCTTAGAAATGTTGCTCGTGATGGAAGGACTGTTATTTCTTCTATTCATCAGCCTAGCAGTGAAGTCTTTGCACTTTTTGATGATCTTTTCTTGCTCTCTGGTGGTGAAACTGTTTATTTTGGTGAAGCTAAAATGGCAATCGAGTTTTTTGCTGAAGCTGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCACTTCCTAAGATGCATCAATTCTGACTTCGACGTTGTAACGGCTACACTGAAGGGATCTCAAAGGATTCCTGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCACAAATTAAGTCAATGCTAGTTGAGAGATTTAAGCGTTCAACGTATGCCAGAAGGGTAAAAGACAAGATTCAAGAACAATCAACCAATGAAGGGCTTGAAACTGAGATAAACCTTGGAAGCCAAGCTAGTTGGTGGAAGCAACTCAAAACACTGACAAGGAGATCATTTGTGAACATGTGCAGAGATGTTGGTTACTACTGGCTGAGGATTATGATCTATATCATTGTATCTATATGTGTTGGAACCATCTATTTTGATGTTGGCTACGGCTACACTTCCATCTTGGCTCGTGGTGCCTGTGGTGCATTTATATCAGGATTTATGACTTTCATGTCAATTGGAGGCTTTCCATCTTTTATTGAAGAAATGAAGGTATTTTATAGAGAAAGGATGAATGGATATTATGGTGTAGCAGCATTTATTTTATCAAACTTTCTTTCATCATTCCCATTCTTGGTTGCTATTGCTCTTACTTCTTGCACAATCACATATAACATGGTGAAATTCAGACCCGGATTCATTCACTATGCGTTTTTCACTATTAACATCTACGGATGCATCTCAGTGATTGAGAGTCTCATGATGGTTGTAGCTGCACTTGTTCCAAATTTTCTCATGGGAATCATTACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTTAGGTTGCTATCTGATCTTCCAAAACCTGTTTGGCGCTATCCAATTTCATATATCAGTTACGGTGCATGGGCGATACAGGGTTCATACAAGAATGACTTGCTTGGTCTTGAGTTTGATCCACTGCTCCCGGGTAACCCAAAACTGACAGGAGAATATGTGATAACACACATGTTGGGGATTGAATTAAGCCATTCCAAGTGGTGGGACTTGGCAGCACTTTTTCTCCTTCTCTTAGGTTACAGGATATTGTTCTTTGTTGTTCTCAAGTTCAAGGAAAGAGCATCACCATTATATAGAAAACTTGCTGCCAAAAGAACCATACAACAGCTTGAGAAAAGACCTTCTTTCAGGAAAATGCCATCTGTTACTACTTCCAGGAGGCATCAACCACTTCATTCACTATCTTCTCAAGAGGGTCTTGATTCTCCACTCCACACCTAG 2202 0.3969 MLLSVHTQDIKLSHLFSLFIIFPCNCLIRYSINASNLHNNMEIEAASGSNNKGYNMDESDEEAYCGLNRGSFLAWEDLRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGRLAKNVVMTGNVFLNGKKKTPGYGFVAYVTQEDVLLGTLTVKETITYSAHLRLPSTMSKEEINGLVDATIIEMGLHDCADRLIGNWHLRGISGGERKRTSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIPDVPNSADPFMNLATAQIKSMLVERFKRSTYARRVKDKIQEQSTNEGLETEINLGSQASWWKQLKTLTRRSFVNMCRDVGYYWLRIMIYIIVSICVGTIYFDVGYGYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERMNGYYGVAAFILSNFLSSFPFLVAIALTSCTITYNMVKFRPGFIHYAFFTINIYGCISVIESLMMVVAALVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFDPLLPGNPKLTGEYVITHMLGIELSHSKWWDLAALFLLLLGYRILFFVVLKFKERASPLYRKLAAKRTIQQLEKRPSFRKMPSVTTSRRHQPLHSLSSQEGLDSPLHT* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2385 733 MobiDBLite consensus disorder prediction 705 733 - -
Mtr4g2385 733 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 317 IPR003439 GO:0005524
Mtr4g2385 733 PANTHER ABC TRANSPORTER G FAMILY MEMBER 12 57 727 - -
Mtr4g2385 733 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 307 IPR027417 -
Mtr4g2385 733 CDD ABCG_EPDR 70 299 - -
Mtr4g2385 733 Pfam ABC-2 type transporter 409 618 IPR013525 GO:0016020|GO:0140359
Mtr4g2385 733 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 57 727 - -
Mtr4g2385 733 Pfam ABC transporter 96 245 IPR003439 GO:0005524
Mtr4g2385 733 Gene3D - 73 311 IPR027417 -
Mtr4g2385 733 MobiDBLite consensus disorder prediction 699 733 - -
Mtr4g2385 733 Pfam ABC-2 type transporter 274 332 IPR043926 GO:0140359
Mtr4g2385 733 SMART AAA_5 103 274 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2385 Mtr-Chr4 37437180 37447080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2385 89 286 Calmodulin-binding Proteins AT2G36910 30.000 7.11e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2385 K05681 - gmx:100777598 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2385 4 37437180 37447080 Mtr4g2385 4 37437180 37447080 ECH
Mtr7g3103 7 47984691 47990871 Mtr4g2385 4 37437180 37447080 ECH
Mtr1g2180 1 32003956 32013375 Mtr4g2385 4 37437180 37447080 ECH