Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2377 ATGGAGAGCTTAGAAGGAAGCAACATGACAATGGCTATCATTCCTGATGCAGAGATGTTGCCAACAGTTGTTGGCAATGCCAAACTCTCAGGAGAAGAGAGACATGCAAATATTCATGAAGAGGACATTAATAGACTTACCAACATTGCTATCACACAATGCATTGGTGAAACTGATGCCAATTTAGATGCAGTAATTACTCACTATGTGGAGACTATAAACAAGTACAACTTGCGCAACTTAGGTTATCCCACAAATCAAGATTTCAACTATGAAGCATTAGCACCGTTGCTTCAATTTCACTTGAACAATGCTGGAGATCCATTTCTTGGAAGCAGCTTCTCTCTCAATTCAATGACATTTGAAGTTAGTGTGCTTGATTGGTTTGCTAAACTATGGGAGATAGAGAAGGATCAATACTGGGGATACATCACAACTGGTGGAACGGAAGGGAATCTTCATGGGATTTTAGTAGCGAGAGAACAATTTCCAGATGGAATTCTATATACCTCACAAGATTCACATTATTCGATATTCAAAATTGCAAGAATGTATCGAATGCAATGTGTGAAGGTTGGCTCTTTATTATCAGGTGAAATTGATTGTGTTGAACTAGAGGCTTCTCTACTTTCCCACAAGGATAAACCAGCCATCATCAATCTAAACATAGGGACAACTTTGAAAGGTGGGATTGATGATCTTGATCTTGTAATACAAACACTAGACAAATGTGGTTTTACTCGTGATCAATTCTATATTCATTGTGATGGAGCTCTATTTGGAATCATGTTGCCTTTTATCAACCAAGCTCTAAGGATTAGCTTCAAGAAACCTATCGACAGTGTAACTATTTCAGGTCATAAGTTTTTGGGATGCCCATCTCCTTGTGGTGTTTTGATAACTCGTTTGAAATATATCAATGCACTATCTAGAGATGTTGAATATATTGCTTCAAGGGATGCTACCATCACAGGTAGCCGTAGTGGGCATGCTCCAATCTTACTTTGGTATGCTCTCAAAAAAAGGGGTTTAATAGGACTCGAGAATGAAGTACATGAATGCATAACGAATGCACGTTACTTACTAAATCAACTACGTGATGCTGGAATTGGTGCAATGTTAAACGAGTTTAGCAACATAGTTGTTTTTGAGAGACCCTTTGATGATCACTTTACTCGTAGATGGAATTTAGCAAGCAATGAAAATATTGCACATGTGGTAGTGTTGAAGCACATTACTATTGAAATGCTTGACACCTTTGTTCATGAATTTATCCAAAAACGATCGATTTGGTCTAAAGATGGACACTTTCAACCTCCATGTATTGCAAGCGACGTTGGTTCTAAAAATTGTGCTTGTTCTATACACAGCTTATCAAGAAATTATTAG 1389 0.3772 MESLEGSNMTMAIIPDAEMLPTVVGNAKLSGEERHANIHEEDINRLTNIAITQCIGETDANLDAVITHYVETINKYNLRNLGYPTNQDFNYEALAPLLQFHLNNAGDPFLGSSFSLNSMTFEVSVLDWFAKLWEIEKDQYWGYITTGGTEGNLHGILVAREQFPDGILYTSQDSHYSIFKIARMYRMQCVKVGSLLSGEIDCVELEASLLSHKDKPAIINLNIGTTLKGGIDDLDLVIQTLDKCGFTRDQFYIHCDGALFGIMLPFINQALRISFKKPIDSVTISGHKFLGCPSPCGVLITRLKYINALSRDVEYIASRDATITGSRSGHAPILLWYALKKRGLIGLENEVHECITNARYLLNQLRDAGIGAMLNEFSNIVVFERPFDDHFTRRWNLASNENIAHVVVLKHITIEMLDTFVHEFIQKRSIWSKDGHFQPPCIASDVGSKNCACSIHSLSRNY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2377 462 Pfam Pyridoxal-dependent decarboxylase conserved domain 117 370 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mtr4g2377 462 Gene3D Aspartate Aminotransferase, domain 1 341 428 IPR015422 GO:0003824
Mtr4g2377 462 PANTHER - 30 456 - -
Mtr4g2377 462 Gene3D - 97 340 IPR015421 GO:0003824
Mtr4g2377 462 PANTHER SERINE DECARBOXYLASE 30 456 - -
Mtr4g2377 462 SUPERFAMILY PLP-dependent transferases 78 425 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2377 Mtr-Chr4 37315822 37318392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2377 223 357 Calmodulin-binding Proteins AT1G65960 27.778 2.21e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2377 K25193 - gmx:100781665 688.723