Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2357 ATGAGTCTACTTGAGAATCTTGCTATGTTGCAAGAAGGGTCATCTTCTGTTACTTCTTCAGCCTTAAAGCTCTTCTCCATGATGCCACCTTCATCTGGCTTTGGATCTCCACACCCTTGGCTTAAGGAACTGAAATCTGAGGAAAGGGGTTTGTACTTGATCCATTTGTTGCTCACTTGTGCAAACCATGTAGCTGCTTGTAATCTTGAGCATGCGAATGCAACACTTGAGCAAATTTCGATGCTTGCTTCCCCTGACGGCGATACTATGCAGCGGATTGCAGCGTATTTTACCGAGGCACTTGCTGATAGGATTCTTAAAGCATGGCCTGGAATCCACAAAGCACTCAACTCTACTCGAGTGTCGATGGTTTCAGAAAAGATTCTTGTGCAGAAGCTCTTTTTTGAGTTTTTCCCTTTCTTGAAAGTAGCATTTGTTCTCACAAATCAGGCTATCATTGAAGCAATGGAAGGGGAGAGAATGATTCACATAATTGATCTCAATGCTGCTGAACCTGCTCAGTGGATTTCACTTCTCCAAGTTTTGAGTGCTCATCCTGATGGCCCTCCACATTTGAGAATCACCGGCGTTCATCAGAAGAAAGAGGTTCTCGACCAGGTAGCTCATAGACTGATTGCAGAAGCTGAAAAATTAGATACACCATTCCAATTCAATCCTGTTGTCAGCAAATTGGAAAACCTTGATTTTGAGAAACTTCGTGTTAAAACCGGGGAGGCACTAGCAATTAGTTCGATTCTCCAATTACATACCCTTTTAGCCTTGGATGATGAAACCATGAAGAGAAAATCTCCTCTTTTGTTAAAAACCTCAAATGGAATTCACTTACAAAGATTCCATCCAATAAACCGAAGCACATTCGACAATTTGCTTGAGAAAGATTTGATTAGCAGCTATACCAGAAGTCCTGACTCAAGTTCATCATCACCGGCTTCATTGAAGACTTCAAATTCAATGAACACGGAGATGTTTCTCAATGCATTGTGGAGTTTATCACCAAAGGTGATGGTTGTAACAGAACAAGACTCTAATCATAATGGCTCACATTTTACGGACAGGCTACTGGAAGCTCTACACTCTTATGCAGCACTATTTGATTGTTTGGAATCAACGATCCCAAGAACCTCATTGGAGAGATTTAGGGTGGAGAAACTGCTTTTTGGTGAGGAAATCAAGAACATTATTGCATGTGAGGGATTAGAAAGAAAGGAAAGGCATGAAAAGCTGGATAAGTGGTTTATGAGATTTGATTTAGCTGGATTTGGTAATGAGCCTCTAAGTTATTTTGGTAAGTTGCAAGCAAGGAGGTTCATGCAGAGTTATGGTTGTGAGGCATATAGAATGAAGGAGGAAAATGGTTGTGTGCTAATATGCTGGCAAGATAGATCCTTGTTTTCAATATCAGCTTGGAGATCAAGGAAGTAA 1443 0.4096 MSLLENLAMLQEGSSSVTSSALKLFSMMPPSSGFGSPHPWLKELKSEERGLYLIHLLLTCANHVAACNLEHANATLEQISMLASPDGDTMQRIAAYFTEALADRILKAWPGIHKALNSTRVSMVSEKILVQKLFFEFFPFLKVAFVLTNQAIIEAMEGERMIHIIDLNAAEPAQWISLLQVLSAHPDGPPHLRITGVHQKKEVLDQVAHRLIAEAEKLDTPFQFNPVVSKLENLDFEKLRVKTGEALAISSILQLHTLLALDDETMKRKSPLLLKTSNGIHLQRFHPINRSTFDNLLEKDLISSYTRSPDSSSSSPASLKTSNSMNTEMFLNALWSLSPKVMVVTEQDSNHNGSHFTDRLLEALHSYAALFDCLESTIPRTSLERFRVEKLLFGEEIKNIIACEGLERKERHEKLDKWFMRFDLAGFGNEPLSYFGKLQARRFMQSYGCEAYRMKEENGCVLICWQDRSLFSISAWRSRK* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2357 480 ProSiteProfiles GRAS family profile. 44 477 IPR005202 -
Mtr4g2357 480 PANTHER SCARECROW-LIKE PROTEIN 3 11 479 IPR030008 GO:0003700|GO:0005634|GO:0009739
Mtr4g2357 480 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 479 IPR005202 -
Mtr4g2357 480 Pfam GRAS domain family 53 477 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2357 Mtr-Chr4 37114258 37116688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2357 7 480 GRAS Transcription Factor Family AT1G50420 63.147 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g2357 GRAS 4.5e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2357 - - gmx:100814131 748.814