Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2352 ATGCTTCAAAGCTTGGTCCCTCGTCCCCCTCTCTCTTCCAAACCTAATATGAACACCAAACGCGCTCAACGCGAACACGACGACGACGACACCAACGTTCATGAACCATCTTTCAAAAGACCTAACTACTCCAGCGAGAAAGCCGTGGCGGAACACGACGCACGCGACGACGAACAACAACAAATCTTAGAACATGAAACGGAAACCGAAACCGAAGGAGAAGAATCTACAGGTCTCAAACTTCTAGGGCTTTTGCTTCAATGTGCTGAGTGTGTTGCCATGGATAACCTCGACTTCGCCAACGACCTTTTACCGGAGATAACTGAACTCTCTTCACCGTTCGGTACTTCACCGGAGCGAGTAGGTGCGTATTTTGCACAAGCGTTACAAGCGCGTGTGGTGAGTTCTTGTCTTGGAAGCTACTCGCCGTTAACTGCTAAATCGGTAACGCTAAATCAGTCTCAGAGAATCTTCAACGCGTTTCAATCCTACAACTCAGTTTCACCGTTGGTGAAATTCTCACACTTCACTGCCAATCAGGCAATTTTTCAGGCTTTGGACGGTGAAGATCGTGTCCACATCATTGATCTTGATATCATGCAAGGACTTCAATGGCCAGGATTGTTCCACATCCTCGCTTCACGGTCGAAGAAGATCCGTTCGGTGAGAATTACCGGTTTTGGATCTTCTTCGGAGTTGTTAGAATCAACCGGAAGAAGACTCGCTGATTTCGCGAGTTCGCTCGGGCTACCGTTCGAGTTTCATCCGGTTGAGGGTAAAATCGGAAGTGTAACTGAACCGGGTCAACTCGGTGTTAGACCGAACGAAGCGATTGTGGTTCATTGGATGCATCATTGTTTGTATGATATAACAGGAAGCGATTTAGGAACGTTGAGATTGCTGACTCAGCTGAGGCCAAAACTGATCACAACCGTTGAACAGGATCTTAGCCATGCTGGTAGCTTCTTAGCGAGGTTTGTGGAGGCTTTGCATTATTACAGCGCGTTGTTCGACGCTCTAGGGGATGGTTTGGGTGTGGATAGTGTTGAGAGGCATATGGTGGAGCAGCAGCTGTTGGGGTGTGAGATAAGGAACATTATCGCTGTGGGTGGACCTAAGAGGACTGGTGAAGTGAAAGTTGAGAGGTGGGGGGATGAGTTGAAACGGGCCGGATTTCGACCCGTTTCATTAAGGGGTAACCCGGCTTCTCAGGCGAGTTTGTTGTTGGGGATGTTTCCTTGGAGAGGGTATACTTTGGTGGAAGAGAATGGTTCTCTCAAGCTTGGTTGGAAGGATCTCTCTTTATTGATTGCGTCTGCTTGGCAACCGTCTGATTTGATTGCTTATGTTGATTGA 1356 0.4801 MLQSLVPRPPLSSKPNMNTKRAQREHDDDDTNVHEPSFKRPNYSSEKAVAEHDARDDEQQQILEHETETETEGEESTGLKLLGLLLQCAECVAMDNLDFANDLLPEITELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLNQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSVRITGFGSSSELLESTGRRLADFASSLGLPFEFHPVEGKIGSVTEPGQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGVDSVERHMVEQQLLGCEIRNIIAVGGPKRTGEVKVERWGDELKRAGFRPVSLRGNPASQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDLIAYVD* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2352 451 ProSiteProfiles GRAS family profile. 72 442 IPR005202 -
Mtr4g2352 451 MobiDBLite consensus disorder prediction 1 58 - -
Mtr4g2352 451 Pfam GRAS domain family 83 442 IPR005202 -
Mtr4g2352 451 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 60 443 IPR005202 -
Mtr4g2352 451 MobiDBLite consensus disorder prediction 1 18 - -
Mtr4g2352 451 MobiDBLite consensus disorder prediction 19 36 - -
Mtr4g2352 451 PANTHER SCARECROW-LIKE PROTEIN 23 60 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2352 Mtr-Chr4 37037312 37039583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2352 68 445 GRAS Transcription Factor Family AT5G41920 69.974 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g2352 GRAS 3.2e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2352 - - gmx:100816249 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2352 4 37037312 37039583 Mtr4g2352 4 37037312 37039583 ECH