Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2351 ATGGCATCAATGGAAGACATCAACATGTGTACTGAGCAAATTACACTTCCAGGATTCAGATTTCACCCCACAGAAGAAGAACTCCTTGATTTCTATCTTAAGAATATGGTTGTTGGCAAAAAACTTCGTTATGATGTCATTGGTTTTCTCAATATCTATCACCATGATCCTTGTGACTTGCCAGGTTTGTCAAAGGTTGGGGAAAGAGAATGGTATTTTTTCGTGCCAAGGGACAAAAAACATGGTAGTGGAGGAAGGCCTAACCGCACAACTGAAAAAGGTTTCTGGAAAGCCACCGGTTCGGACCGGAAAATCGTGACGTTATCGGATCCGAAACGCATAATTGGGTTGAGGAAGACGTTGGTTTTCTATGAGGGAAGAGCTCCAAGAGGAACCAAGACTGATTGGGTTATGAATGAATACCGTTTACCTGACAATAGCCCCTTGCCTAAGGACATAGTATTATGCAAGATATATAGAAAGGCAACTTCCTTGAAAGTGCTTGAGCAAAGAGCAGCAGAAGAAGAAGAGATGAAACAAATGGTGGGTTCCCCTACATCTTCCCCACCTTCCTCTACAGACACAATCTCCTTCAACTACACACAACAAGACCAAAACATGTCCATGCCCTTATTATTTCAACAAGTCATTCCTAAGAAAGAATCTGAACATGAAATAATTAAAACTGAAGATATGGTTTCTTTGTCAAGTCATGAAAAAATTGTGAAAGATAACAAAAAACCTTGTGGAACATCTTTGCAATTGCCCTTAGGGAAGGACAATGTACCTGAGCTTCAGTTACCTATAGCTGCTGATTGGACCCAAGATACATTTTGGGCTCAGTTTAATAGTCCTTGGCAACATAACTGGAGTGCTTACACCAATATCCTGAATTTTTAA 900 0.4033 MASMEDINMCTEQITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPCDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGTKTDWVMNEYRLPDNSPLPKDIVLCKIYRKATSLKVLEQRAAEEEEMKQMVGSPTSSPPSSTDTISFNYTQQDQNMSMPLLFQQVIPKKESEHEIIKTEDMVSLSSHEKIVKDNKKPCGTSLQLPLGKDNVPELQLPIAADWTQDTFWAQFNSPWQHNWSAYTNILNF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2351 299 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Mtr4g2351 299 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Mtr4g2351 299 SUPERFAMILY NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Mtr4g2351 299 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 299 - -
Mtr4g2351 299 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 8 299 - -
Mtr4g2351 299 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2351 Mtr-Chr4 37024207 37026798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2351 14 296 NAC Transcription Factor Family AT2G17040 59.859 1.81e-112 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr4g2351 NAM 8.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2351 - - gmx:100816770 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2351 4 37024207 37026798 Mtr4g2351 4 37024207 37026798 ECH