Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2340 ATGTCTGTTCAGACCTGCGATAGAATTTGTTTGGCGCCCAAAAACCCTTTAAAAGGGAAGTTTGGGACCTCTATTGGAGCACATGAGATTTTCAGCCCAGAGACATGGAAAGCAGCTTTGACAGAACTAGTGGCAACAGCCTCTCTAATGTTCACCTTGACTAGCTCCATTATTGCATGCTTGGACTCACACGAAGTTGATCCTAAGCTTATTGTTCCCTTTGTAGTTTTCATCATAGCCTTCTTATTCTTAATTGTGACAGTTCCTCTATCTGGTGGCCACATGAGTCCTGTTTTCACATGCATAGCTGTTCTAAAAGGTGTTGTCACTCTTTCTCGTGCAGTCCTTTACGTCTTGGCACAATGCATTGGCTCAACAATTGGCTTCTATATACTAAACTGTGTAATGGATCCAAAATTAATAAATACATATTCATTGGGAGGTTGTGCTATTGGTGGCAAAGAACTCAATTCTAGTATTAATCAGCATGATGCTTTGTTATTGGAATTCTCTTGTACATTTTTGGTACTCTTTTTGGGTGTCACGTTAGGTTTTGACAAAAAGATGTCAAAGAATTTGGGGTTGACAATGGTATGCTTGGTGATAGCTGGTGCCATGGCATTGGCAGTTTTTGTGTCGATAACTATAACGGGTCGGGCCGGTTATGCTGGTGTTGGGCTAAACCCGGCAAGATGCTTAGGCGCGGCGTTGATTCATGGAGGCTCGTTATGGAATGGTCATTGGGTTTTTTGGGTTGGACCTATCTTGGCATGTTTAATCTATTATAGTATCTCTATCAACCTACCAAAGGAGGGTTTGGTTTGGGTGGATGGAGAATATGATATCTTAAAGTTGGCTCTTGGTTCTTGCGCAACTATTCATAATGGTGATGTTTCAGATGATATCACAATAGAAGGAAGTGGAGCTGGCTTTCAAGAAGGTCATGTATGA 951 0.4154 MSVQTCDRICLAPKNPLKGKFGTSIGAHEIFSPETWKAALTELVATASLMFTLTSSIIACLDSHEVDPKLIVPFVVFIIAFLFLIVTVPLSGGHMSPVFTCIAVLKGVVTLSRAVLYVLAQCIGSTIGFYILNCVMDPKLINTYSLGGCAIGGKELNSSINQHDALLLEFSCTFLVLFLGVTLGFDKKMSKNLGLTMVCLVIAGAMALAVFVSITITGRAGYAGVGLNPARCLGAALIHGGSLWNGHWVFWVGPILACLIYYSISINLPKEGLVWVDGEYDILKLALGSCATIHNGDVSDDITIEGSGAGFQEGHV* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2340 316 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 298 - -
Mtr4g2340 316 Gene3D Glycerol uptake facilitator protein. 24 268 IPR023271 -
Mtr4g2340 316 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2340 316 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2340 316 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2340 316 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2340 316 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2340 316 PANTHER AQUAPORIN-LIKE 1 298 - -
Mtr4g2340 316 SUPERFAMILY Aquaporin-like 36 260 IPR023271 -
Mtr4g2340 316 Pfam Major intrinsic protein 32 257 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2340 Mtr-Chr4 36864742 36866175 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2340 28 261 Major Intrinsic Protein MIP AT3G26520 28.395 7.52e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2340 K09866 - gmx:100804160 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2340 4 36864742 36866175 Mtr4g2340 4 36864742 36866175 ECH