Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2338 ATGAATTCAACAAACTCACGTGTAGCTGATGAAAATCTTTCTATGTCATTTCAAACTTGCGAGAAAATTTGTTTGGGACCTAAAACCCCTTTAAAAGGGAAGTTTCAGGCTTCTCTTGGCGTGCATGAAATTTTTAGCCCTGAGACTTGGAAGGCAGCTTTGATAGAATTAGTGGCAACTGCCTCTCTAATGGTCACCTTCACTGCCTCCATTATTGCATGCTTGGACTCACAAGAACTAGATCCTAAGCTTATTATTCCCTTTGCAGTCTTCATCATAGCTTTTTTGTTCCTAATTGTGACAGTTCCTCTATCTGGTGGCCATATGAGTCCTGTTTTCACATTCATAGCTGCTCTAAAAGGCTTTGTCACTATTTCTCGTGCACTCCTTTACGTGTTAGCACAATGCATTGGCTCAATAATTGGTTTCTATATACTAAACTGTGTGATGGATCCAAAGTTAATAAACACATATTCATTAGGGGGTTGTGCTCTTGGTGACAAAGGACTCAATTCTAGTATTAATCAGCACGAAGCTTTGTTATTGGAATTCTCTTGCACATTTTTGGTACTCTTTTTGGGTGTCACATTGGCTTTTGACAAAAAAAGGTCAAAGAATTTGGGCTTGCCATTGGTGTGTTTGGTGGTAGCTGGTTCCATGGCATTGGCAGTATTTTTGTCTATAACGGTATCAGGTCGGACCGGTTACGCTGGCGTTGGTCTTAACCCAGCAAGATGCTTAGGCGCGGCGTTGCTTCATGGAGGCTCATTATGGAATGGACATTGGCTTTTTTGGGTTGGACCTATCTTGGCATGTTTACTCTATTATAGTGTCTCTATCAACCTACCTAAAGAAGTTTCAGTTTGGGATGATGAAGAATATGTTGTCTTAAAGCTGCCTCTTGGTTCTTGTAGGACTATTCCTAATGGTGACATTTTAAATGATATCACAATAGAAGGAGGTGCACAAGGCTATCAAGTCCATGTATGA 990 0.4051 MNSTNSRVADENLSMSFQTCEKICLGPKTPLKGKFQASLGVHEIFSPETWKAALIELVATASLMVTFTASIIACLDSQELDPKLIIPFAVFIIAFLFLIVTVPLSGGHMSPVFTFIAALKGFVTISRALLYVLAQCIGSIIGFYILNCVMDPKLINTYSLGGCALGDKGLNSSINQHEALLLEFSCTFLVLFLGVTLAFDKKRSKNLGLPLVCLVVAGSMALAVFLSITVSGRTGYAGVGLNPARCLGAALLHGGSLWNGHWLFWVGPILACLLYYSVSINLPKEVSVWDDEEYVVLKLPLGSCRTIPNGDILNDITIEGGAQGYQVHV* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2338 329 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 15 311 - -
Mtr4g2338 329 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2338 329 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2338 329 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2338 329 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2338 329 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2338 329 SUPERFAMILY Aquaporin-like 47 274 IPR023271 -
Mtr4g2338 329 PANTHER AQUAPORIN-LIKE 15 311 - -
Mtr4g2338 329 Pfam Major intrinsic protein 46 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g2338 329 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2338 Mtr-Chr4 36859889 36861228 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2338 50 274 Major Intrinsic Protein MIP AT3G53420 29.114 6.04e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2338 K09866 - gmx:100804160 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2338 4 36859889 36861228 Mtr4g2338 4 36859889 36861228 ECH