Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2319 ATGGGTTTAGGTTCAATTATAAATTTGAATGTTGTTATTCTTGTTCTATATGTTTGTTGGAGCAAACAAGCTTTAGGTGTGACTGAGCAAGAAGAGGATAGAGTGTATGGACTACCTGGGCAGCCTCCAGTGAATTTCAAACAATATGCTGGGTACATAAATGTTAATGAAACTCATGGAAGAGCACTGTTTTATTGGTTTTTTGAGTCTGTTGATCAACCTCAAACAAAACCTCTTCTCCTTTGGCTTAATGGAGGCCCTGGTTGTTCTTCAATTGGCTATGGAGAAGCAGAGGAACTTGGACCCTTTTTCCCCCAAAATAGCAGCCAACCTAAGCTCAAGTTGAACCCATATTCTTGGAATAAAGCTGCAAATCTTTTGTTTCTTGAATCCCCTGCTGGAGTGGGATTTTCTTACACCAACACCACCAGTGATATAAGTGAACTTGGTGACACCATTACAGCTAAGGATTCACACACATTCCTCATCAATTGGTTTAAAAGATTTCCTCAATTCAAATCACATGATTTCTACATTGCTGGTGAAAGCTATGCAGGACATTATGTTCCACAACTTTCTGAGCTCATTTTGGATAACAATCACAATTCTTCCGAGGAAGATTACATTAACTTCAAAGGGATCATGATTGGAAATGCTTTATTGGATGATGAAACAGATCAAAAAGGTATGATAGAGTATGCATGGGACCATGCAGTAATATCTGATGGTTTATATCATAACATCACAACCATATGCAACTTCAGCCATCCAATTCAAAATCAAACAGATGAATGCAATACAGAACTTAATAAATACTTCGATGTGTATAAGATTATAGACATGTATAGCTTGTACGCTCCCATGTGTTTCAGCAATATCAGCAACGTCAGAAGTCATTCTTTTTCCAAATTGGTACTGGACGGGTGGCATAAAAATCTAGCAGGATATGATCCATGTGCATCAGATTATACTGCAGCATACCTAAATAGGCCAGAGGTTCAAAAGGCACTTCATGCTAATGTCACAAAAATTTCATATCCATGGAGTCACTGCAGTAATAATATAACATTTTGGAATGACGCACCTGTGTCCATGCTTCCTGTCCTCAACAAGCTTATTGCTGCTGGTATTCGTATATGGGTTTACAGTGGAGATACAGATGGAAGAATTCCAGTAACTGCAACAAGATACACATTAAGAAAATTGGGACTTCCTATAGTTCAAGATTGGACTCCCTGGTATACTAGTCGTCAGGTGGGAGGATGGAACATTGTATACGACGGGCTAACATTTGTGACCATAAGAGGTGCTGGTCATCAAGTTCCTACTTTTGCTCCCAAACAAGCTCTTCAGCTAGTTCGACATTTCTTAGTCAATAAGAAATTACCACAACATCCTATTTAA 1404 0.386 MGLGSIINLNVVILVLYVCWSKQALGVTEQEEDRVYGLPGQPPVNFKQYAGYINVNETHGRALFYWFFESVDQPQTKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPAGVGFSYTNTTSDISELGDTITAKDSHTFLINWFKRFPQFKSHDFYIAGESYAGHYVPQLSELILDNNHNSSEEDYINFKGIMIGNALLDDETDQKGMIEYAWDHAVISDGLYHNITTICNFSHPIQNQTDECNTELNKYFDVYKIIDMYSLYAPMCFSNISNVRSHSFSKLVLDGWHKNLAGYDPCASDYTAAYLNRPEVQKALHANVTKISYPWSHCSNNITFWNDAPVSMLPVLNKLIAAGIRIWVYSGDTDGRIPVTATRYTLRKLGLPIVQDWTPWYTSRQVGGWNIVYDGLTFVTIRGAGHQVPTFAPKQALQLVRHFLVNKKLPQHPI* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2319 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Mtr4g2319 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Mtr4g2319 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Mtr4g2319 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Mtr4g2319 467 SUPERFAMILY alpha/beta-Hydrolases 31 464 IPR029058 -
Mtr4g2319 467 Gene3D - 319 355 - -
Mtr4g2319 467 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Mtr4g2319 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Mtr4g2319 467 PANTHER CARBOXYPEPTIDASE 24 466 - -
Mtr4g2319 467 Gene3D - 365 458 - -
Mtr4g2319 467 Pfam Serine carboxypeptidase 39 458 IPR001563 GO:0004185|GO:0006508
Mtr4g2319 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 24 466 IPR001563 GO:0004185|GO:0006508
Mtr4g2319 467 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2319 Mtr-Chr4 36664591 36671231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2319 327 462 Calmodulin-binding Proteins AT2G22960 29.927 9.87e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2319 K16297 - gmx:100781503 809.675