Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2302 ATGTCGCGCCAGTCGACTGGTTCCGCTTTCACCCAATCAAAAACTCTTGATAATAAATATATGCTTGGAGATGAGATTGGGAAAGGAGCTTATGCTCGAGTTTACAAAGGTTTGGACTTGGAGAATGGAGATTTTGTTGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTTAACATTATCATGCAAGAAATTGATCTGTTAAAGAATTTGAATCACAAAAACATTGTAAAATATCTTGGATCTTTGAAGACAAAGAGTCACCTGCACATAGTTCTTGAGTATGTTGAGAATGGCTCACTTGCAAATATTATCAAGCCAAATAAATTCGGACCCTTTCCAGAATCGTTGGTTGCAGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTACCTACATGAGCAAGGTGTTATCCATCGGGATATTAAAGGTGCAAATATATTGACAACTAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGTGTTGCAACAAAATTAACAGAAGCTGATGTTAACACTCATTCAGTTGTTGGAACACCATACTGGATGGCGCCGGAGGTTATAGAAATGTCTGGAGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACAGTTGTTGAGCTTCTTACATGTGTGCCTCCTTATTATGATTTGCAGCCTATGCCGGCTCTTTTCCGTATTGTCCAGGATGACAATCCTCCAATTCCTGATAGCCTTTCGCCTGACATTACTGATTTTCTGCATCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAAACGCTGTTGTCTCACCCTTGGATTCAAAACTGCAGACGGGTCCTGCAGTCTTCTCTTCGTCATAGTGGAACATTAAGAAATATAGAGGAAGGTGCTTCTACAAATGGAAAAGCTTCTGATGGTGATCATAAGCTTGCAGGTGAAAACTCTTCTGTGCAGAAAGAGGGCACTGCGGCTGCTGAAAGCTGCAGATCTCAAGATGGAAATGCTTCGGATTCTAATTTTCCCAATGAAAGAACAGAAAAGGCTGATGATGTCCCATCGGATGAGGTTCTTACCTTAGCCATCCATGAGAAGTCCGTTCAACAAATTGGTTCTAGCAAACCCTCTTCTGATGGAGAAATGGGTAGCTCTGAGCCAACTGGTAATCATGAAATTTCAAACACTGAAGGCGTGATCAACGGAGAAGTTGGATCACCACAGTCAAGAGGAATGACTAATAAGGTTGGAGGAAAATCATTTGGTTTTGGACCAAGAGGTCTTGATAAAGGTCCCGCAAAGGCAATGAAGATGCTGCACCCTGCGGAAGGAAATGGGCTGAGTAAATTTAGTGACCCTCCAGGAGATGCCTACTTGGATGATTTATTTCCGTTAGACAAACGACATGGGGAGGTTGTAGGTGAGGCATCCACATCTACATCCACTTCACATATGGCAAAAGGCAATGCATCTATGATTGATGGAGGGGAAAAGGACCTGGCAAAAGAGTTGAGAGCTACAATTGCACGAAAGCAGTGGGAGAAAGAGAGTGAAATTGGACAGGCAAATAATGGTGGGAACCTTTTACACCGAGTGATGATAGGTGTTCTAAAAGACGATGTGATTGATATAGATGGTTTGGTATTTGATGAAAAACTTCCTGGAGAGAACCTTTTTCCTCTGCAGGCCGTTGAGTTCAGCAAATTAGTTGGTTCATTAAAACCAGAGGAATCAGAAGACGTGATTGTCTCTGCTTGTCAGAAACTCATTGGTATATTTCAGCAGCGGTCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGTTTACTTCCGCTAACTGACTTGCTAGATGTTCCTAAAACTCGTGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAATTAGAGACAACACTGATTTTCAAGAAAATGCTTGTCTTGTTGGATTGATTCCTGCAGTCATGAGCTTTGCTGTACCCGATCGTCCCCGGGAGATTCGTATGGAAGCAGCTTATTTTTTTCAGCAGCTTTGTCAGTCAAGTTCTTTGACGTTACAAATGTTTATAGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTTGAAACTGATTATGCCAAGTACAGGGAAATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAGCAATCAACACCTAGAAATGATTTTTGTCGCATTGCCGCTAAAAATGGCATACTCCTTAGGCTTATAAATACACTTTATAGCTTAAATGAGTCAACACGATTAGCATCTATGTCTGCTGGGAGTGGATTTTTAGTTGATGGTTCGACTCAACGGCCACGTTCTGGTATCTTGGATCCTACACATCCTTTTTTCGGTCAGAATGAGGCACTGCTCTCTTCAGCGGATCAGCAAGATCTCACTAAACTAAGGCATGGAGCACTTGATCATCACTTAGAGTCTTCACATAGAAGGTCAGATTCTAACTACCAAATGGATGTTGATAGACCTCAATCAAGCAATGCTGCAGCTGAAGCTGTGCCACTAGAGATGAGTTTGAATCTTGCATCCAGGGAATCTTCAGCGGGTACATTGAAAGAGAGAGAGAACGCAGATCGTTGGAAAAGTGATCCCTCTCGAGCTGATGTTGAACTCAGACAACGTCTTAGTATTTCTGGCAACAGAAAATCAACAGATAGGTCTTCAAAATTGACAGAAACTTCCTCGAACGGGTTATCAGCAACAGGAGCTACTCAGCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGAGAAAGAGCCCCGATCTGGACGTTTCTCTGGACAGCTTGAATATGTACGTCAGTTTTCAGCGTTAGAAAGACATGAAAGTGTACTCCCTTTGCTTCATGCCTCTGAGAAGAAAACGAACGGTGAACTGGACTTTTTGATGGCAGAATTCGCAGATGTTTCTCAACGTGGAAGGGAAAACGGAAATCTTGACTCCAGTGCTAGAGTGTCTCAAAGAGTTGCTCCCAAGAAATTAGGGACTTTTGGTTCTAGTGAAGGAGCTGCTTCCACATCTGGGATCGTATCTCAGACAGCATCAGGTGTATTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCATCTGGACTACTTTCCCACATGGTTTCATCATTGAATGCAGAAGTTGCAAAAGAGTACCTTGAAAAGGTGGCAGATCTTCTGCTTGAGTTTGCACAAGCAGACACAACAGTGAAGTCTTATATGTGTAGTCAAAGCTTGCTCAGTCGACTTTTCCAGATGTTTAATAGGGTAGAACCACCTATTTTGTTGAAGATACTGAGGTGTATTAATCACCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAGGCAATAAAATACTTGATACCAAATCTTGAACTCAAAGAAGGGTCTCTTGTATCAGAGATACATCATGAGGTCCTGAACGCATTGTTCAACTTATGCAAGATAAATAAGAGGAGACAGGAACAGGCAGCCGAAAATGGAATCATTCCCCACCTGATGCAATTCATCACATCAAACTCTCCTCTCAAACAATATGCATTGCCTCTGTTGTGTGACATGGCTCATGCATCTCGTAACTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATATCTATTTGAACCTTCTTGAGGATGAGTTTTGGTCTGTAACAGCACTAGATTCAATTGCTGTTTGCTTGGCCCATGACAATGATAATAGGAAGGTTGAACAAGCATTGCTAAAGAAGGATGCAGTTCAGAAGCTTGTGATATTCTTCCAGAGCTGTCCAGAGGCGCATTTTGTACACATATTGGAGCCATTCTTGAAAATTATCACAAAATCTGCCCGGATCAATACTACTTTGGCTGTTAATGGATTAACTCCATTACTCATTGCAAAGCTTGATCATCAAGATGCTATAGCTCGGCTTAATTTACTGAGGCTTATAAAGGCTGTTTATGAGCATCACCCTCAGCCCAAGAAACTGATTGTGGAGAATGATCTACCGGAGAAACTTCAAAACTTGATAGGGGAACGCAGAGATGGTCAAGTGTTGGTCAAACAGATGGCAACTTCATTGCTTAAAGCACTACACATAAACACCGTTTTGTAA 4143 0.4197 MSRQSTGSAFTQSKTLDNKYMLGDEIGKGAYARVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVVELLTCVPPYYDLQPMPALFRIVQDDNPPIPDSLSPDITDFLHQCFKKDARQRPDAKTLLSHPWIQNCRRVLQSSLRHSGTLRNIEEGASTNGKASDGDHKLAGENSSVQKEGTAAAESCRSQDGNASDSNFPNERTEKADDVPSDEVLTLAIHEKSVQQIGSSKPSSDGEMGSSEPTGNHEISNTEGVINGEVGSPQSRGMTNKVGGKSFGFGPRGLDKGPAKAMKMLHPAEGNGLSKFSDPPGDAYLDDLFPLDKRHGEVVGEASTSTSTSHMAKGNASMIDGGEKDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLKPEESEDVIVSACQKLIGIFQQRSEQKIVFVTQHGLLPLTDLLDVPKTRVICSVLQLINQIIRDNTDFQENACLVGLIPAVMSFAVPDRPREIRMEAAYFFQQLCQSSSLTLQMFIACRGIPVLVGFLETDYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASMSAGSGFLVDGSTQRPRSGILDPTHPFFGQNEALLSSADQQDLTKLRHGALDHHLESSHRRSDSNYQMDVDRPQSSNAAAEAVPLEMSLNLASRESSAGTLKERENADRWKSDPSRADVELRQRLSISGNRKSTDRSSKLTETSSNGLSATGATQQEQVRPLLSLLEKEPRSGRFSGQLEYVRQFSALERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSQRVAPKKLGTFGSSEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNAEVAKEYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILRCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDIYLNLLEDEFWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVIFFQSCPEAHFVHILEPFLKIITKSARINTTLAVNGLTPLLIAKLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL* 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 855 917 - -
Mtr4g2302 1380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 814 838 - -
Mtr4g2302 1380 SMART arm_5 1119 1163 IPR000225 GO:0005515
Mtr4g2302 1380 SMART arm_5 1078 1118 IPR000225 GO:0005515
Mtr4g2302 1380 SMART arm_5 595 635 IPR000225 GO:0005515
Mtr4g2302 1380 SMART arm_5 1165 1204 IPR000225 GO:0005515
Mtr4g2302 1380 Gene3D Transferase(Phosphotransferase) domain 1 17 310 - -
Mtr4g2302 1380 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1339 - -
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 365 414 - -
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 814 828 - -
Mtr4g2302 1380 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2302 1380 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2302 1380 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2302 1380 PANTHER MAP KINASE KINASE KINASE 2 1339 - -
Mtr4g2302 1380 Gene3D - 557 777 IPR011989 -
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 343 358 - -
Mtr4g2302 1380 CDD STKc_Cdc7_like 19 274 - -
Mtr4g2302 1380 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Mtr4g2302 1380 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Mtr4g2302 1380 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Mtr4g2302 1380 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Mtr4g2302 1380 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 316 342 - -
Mtr4g2302 1380 Gene3D - 1033 1378 IPR011989 -
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 887 917 - -
Mtr4g2302 1380 SUPERFAMILY ARM repeat 1047 1373 IPR016024 -
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 291 423 - -
Mtr4g2302 1380 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 473 492 - -
Mtr4g2302 1380 SUPERFAMILY ARM repeat 566 762 IPR016024 -
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 473 487 - -
Mtr4g2302 1380 MobiDBLite consensus disorder prediction 859 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2302 Mtr-Chr4 36493906 36511750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2302 1 1380 MAP Kinase Kinase Kinase AT3G13530 71.277 0.0 1969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Mtr4g2302 Pkinase 2.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2302 - - aprc:113864564 2351.63