Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2293 ATGATTTTGGACAAGAAAAACATTGAGGAGACTCATTACGAGGTTCTCAATGTCAAGGAGGATGCAAATTACGAAGAAATCCGTGCTAGTTACCGAAGTGCTGCACTCAATTTACATCCTGATAAGCTATTGAAGACATCTGATGCATCCCGCAGTAACCAAACAACTTCAGAGAGATTTCTCAAAGTTCACAAGGCATGGGAAATTCTAAGCAATTCAACCTCTCGTTTAATTTATGACAAGGAACTAAAAAGTTCGAGGCGGGAGGATTTCTTGGCTTCTGAAGTTGCAGAAGAGTTAAGGTTACAGGATATGACTGTTGAAGATGCTGGTGAAACATTGGAATTGTTTTATCAGTGTCGATGTGGTGATTACTTCTCTGTAGACTCATTGGAATTGTAG 402 0.3955 MILDKKNIEETHYEVLNVKEDANYEEIRASYRSAALNLHPDKLLKTSDASRSNQTTSERFLKVHKAWEILSNSTSRLIYDKELKSSRREDFLASEVAEELRLQDMTVEDAGETLELFYQCRCGDYFSVDSLEL* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2293 133 CDD DnaJ 11 72 IPR001623 -
Mtr4g2293 133 Pfam DnaJ domain 11 80 IPR001623 -
Mtr4g2293 133 Gene3D DPH Zinc finger 90 133 IPR036671 -
Mtr4g2293 133 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Mtr4g2293 133 SUPERFAMILY Chaperone J-domain 10 83 IPR036869 -
Mtr4g2293 133 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 1 133 - -
Mtr4g2293 133 PRINTS DnaJ domain signature 13 31 IPR001623 -
Mtr4g2293 133 PRINTS DnaJ domain signature 31 46 IPR001623 -
Mtr4g2293 133 PRINTS DnaJ domain signature 55 75 IPR001623 -
Mtr4g2293 133 SMART dnaj_3 10 75 IPR001623 -
Mtr4g2293 133 Gene3D DnaJ domain 2 88 IPR036869 -
Mtr4g2293 133 SUPERFAMILY CSL zinc finger 96 129 IPR036671 -
Mtr4g2293 133 PANTHER DPH3 HOMOLOG-RELATED 1 133 IPR044248 GO:0017183|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2293 Mtr-Chr4 36385239 36386888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2293 12 80 C2H2 Transcription Factor Family AT1G74250 42.029 2.72e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2293 K17867 - gmx:100814856 207.994