Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2282 ATGGTCTCAAAAACAAGAACCTATGCTATTAATATTGCTATCATAGTATTATTATTTACGGTCAAAGGTGTATTATCAGATGACACAATTCCGATTCCTGCTGAAAAAACTCAATTAGATTCATGGTTTAATAGCAATGTTGGTCCATTAGAACAAAGAAAAAGTGCCCTTGACCCTGCATTAGTGACTGCAGAGGCTGGTGCTAAAGTTATTAAAGTAATGCAAGATGGTAGTGGTGATTTCAAAACCATCACTGATGCGATTAATAGCATACCTACCGGGAACACCAAACGTGTAATTGTGAGCATTGGTGGTGGAAATTATAACGAGAAAATCAAAATTGAAAGGACAAAACCTTTTGTTACATTGTATGGGACACCAGCAAATATGCCAAATTTGACATATGGTGGAACTGCAAAACAATATGGCACGGTTGATAGTGCTACATTGATTGTTGAATCAGATTATTTTGTAGCTGCTAACATGCTCATATCGAATTCTGCACCAAGACCAGATGGAAAGAGCGCAGGTGCTCAAGCAGTAGCATTGAGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAGTTTTTAGGGTTCCAGGACACAATTTGTGATGACAGGCATAATCATTTTTTTAAAGATTGCTTAATTCAAGGCACTGTGGATTTCATTTTTGGAAGTGGGACGTCACTATATTTTAAAAGTGAATTGAGAGCGCTTGGTGACGCTGGGCCAACAGTGATAGTAGCACAGGCAAGAAAAAGTGTATCAGATGCTGATTTATACTCATTTGTGCATTGTGATGTTACTGGAACTGGATCTACCACTTTCTTAGCCAGAGCATGGATGACTTATCCTAAAATTATCTTTGCTTACTCAACTATGAGTAATGTTGTTGATCCTAAAGGGTGGGATAACACCATGCACCCTGAATTTGACAAAACTTCATACTTTGGAGAATATCAGAACACAGGACCAAAGTCAGATCCCAAAGGACGTGCAACTGTCGGAAAACAACTAAGTGCAGCAGAGGTTAAACCTTTCATTACGCTTGGAATGATTCAAGGATCTAAATGGCTCCTTCCTCCTCCAAAAGTCTAA 1104 0.3841 MVSKTRTYAINIAIIVLLFTVKGVLSDDTIPIPAEKTQLDSWFNSNVGPLEQRKSALDPALVTAEAGAKVIKVMQDGSGDFKTITDAINSIPTGNTKRVIVSIGGGNYNEKIKIERTKPFVTLYGTPANMPNLTYGGTAKQYGTVDSATLIVESDYFVAANMLISNSAPRPDGKSAGAQAVALRISGDKAAFYNCKFLGFQDTICDDRHNHFFKDCLIQGTVDFIFGSGTSLYFKSELRALGDAGPTVIVAQARKSVSDADLYSFVHCDVTGTGSTTFLARAWMTYPKIIFAYSTMSNVVDPKGWDNTMHPEFDKTSYFGEYQNTGPKSDPKGRATVGKQLSAAEVKPFITLGMIQGSKWLLPPPKV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2282 367 Pfam Pectinesterase 71 356 IPR000070 GO:0030599|GO:0042545
Mtr4g2282 367 PANTHER PECTINESTERASE 63-RELATED 36 362 - -
Mtr4g2282 367 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Mtr4g2282 367 Gene3D - 66 363 IPR012334 -
Mtr4g2282 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 362 - -
Mtr4g2282 367 SUPERFAMILY Pectin lyase-like 67 361 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2282 Mtr-Chr4 36262626 36264103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2282 11 367 Carbohydrate Esterase AT1G69940 55.278 1.47e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2282 K01051 - gmx:100813174 567.385