Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2264 ATGGCGGCTACTGTATCTGCTTGGTCCAAACCAGGTGCATGGGCACTTGATTCCGAAGAACACGAAGCTGAACTTCTTCAACAACACACCACCAACAACGTTGTTGAAACCAAACCACTTGCGGAATTCCCTTCCCTCGCTGTCGCCGCCGCAACAAAACCTAAAAAGAAGAAAGCACAGACCCTAAGTTTGGCTGAGTTCACTGCTAAACCTGTTTCTTCTTATACAGCTCAAGATCCGGTTGATCTTCCCACCGGTCCACGTCAGCGAACCGCTGAGGAACTTGAACGGGACCGGACTAAGATTGGTGGTGGGTTTAGATCTTACGGTGATAGGGACAGGACAAGGAGTGATGAGAGTTCTGTTTCGAGATGGGGTTCTGGTTCGGGTTCTAGGGTTTCTGAGGATGGGAGAAGGAATGGTAGGGATAGAGATTCGAGTCGGGATTCGGGGCCGTCGAGGGCTGATGAAATTGATAATTGGGCTGCTGGGAAGAAGGCTGTTGTTGGGAATGGGTTTGAGAGAAGGGAGAGAGGTGGAGGTGGAGGTGGGTTTTTTGATTCTCAGTCGCGGGCTGATGGATCAGATAGTTGGGTTTCGGGTAAGGTGCCATCGGAGGGACGGAGATTTGGTTCCGGTGGTGGTGTTGGTGGTGGTGGGTTTGATAGGGAGAGGAAAGTAGGGTTTGGTGTTAGTGGTGGTGCGGATTCCGATAATTGGAATAAGAAGAAAGGTGAATTCAGTGTTGGAAGTGAGAGAAACGAGAATGTTGGTAACGGCAGTGGTGGTGGTGGAAGGCCTAGGCTTGTTTTGCAACCAAGAACAGCGCCGGTGAGTAATGAAAATCAGGATGCTGTTGCTACTAATACTAATGGTGGTGTTGTTTCTGGGAATGTAGCAAAGCCTAAGGGTGCAAATCCGTTTGGTGAGGCAAGGCCAAGGGAGCAGGTTTTGGCTGAGAAAGGTCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGACCATGAAGATTAAGGAGACTGCAGTGGTTGAAGGATTTGGAAAGAGGGGTTTTGGTTCTGGAAATGGGCGCGGTGAAGATCGATCTGAGAGGAGTTGGAGGAAATCTTCACCATCTGATGATGGTCGTTCTGAAAGTGCTGAGAAAGTGGAGGAGGAACACGTCGAAGAAAACTAA 1176 0.494 MAATVSAWSKPGAWALDSEEHEAELLQQHTTNNVVETKPLAEFPSLAVAAATKPKKKKAQTLSLAEFTAKPVSSYTAQDPVDLPTGPRQRTAEELERDRTKIGGGFRSYGDRDRTRSDESSVSRWGSGSGSRVSEDGRRNGRDRDSSRDSGPSRADEIDNWAAGKKAVVGNGFERRERGGGGGGFFDSQSRADGSDSWVSGKVPSEGRRFGSGGGVGGGGFDRERKVGFGVSGGADSDNWNKKKGEFSVGSERNENVGNGSGGGGRPRLVLQPRTAPVSNENQDAVATNTNGGVVSGNVAKPKGANPFGEARPREQVLAEKGQDWKKIDEQLETMKIKETAVVEGFGKRGFGSGNGRGEDRSERSWRKSSPSDDGRSESAEKVEEEHVEEN* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2264 391 MobiDBLite consensus disorder prediction 343 391 - -
Mtr4g2264 391 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 382 - -
Mtr4g2264 391 MobiDBLite consensus disorder prediction 275 296 - -
Mtr4g2264 391 MobiDBLite consensus disorder prediction 52 314 - -
Mtr4g2264 391 MobiDBLite consensus disorder prediction 89 120 - -
Mtr4g2264 391 MobiDBLite consensus disorder prediction 354 391 - -
Mtr4g2264 391 MobiDBLite consensus disorder prediction 66 80 - -
Mtr4g2264 391 Pfam Plant specific eukaryotic initiation factor 4B 7 337 IPR010433 GO:0003743
Mtr4g2264 391 MobiDBLite consensus disorder prediction 135 161 - -
Mtr4g2264 391 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 382 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2264 Mtr-Chr4 36110217 36112477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2264 1 369 Eukaryotic Initiation Factors Gene Family AT4G38710 52.927 1.51e-80 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2264 - - pvu:PHAVU_011G033300g 391.349