Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2257 ATGAAGCAAGAAACGGCAACACCAGAATCGCAAATCGCAAGCAGGAAGAGAAAGGAAATCAAGAGTGGTTTGATGGCGAACAATACTTCTAATTCTGATTCCCATCATAAACGTCTTGGTCTTTTAAAAGATCAAGTTCATTTGGTTAAAAGGAAAGACTCTAATCGCTATGTGATTTCTTCAATACAAGATCAACTATCATTTGAGAAGGGGTTTTTCATTGTGATTCGTGCGTGCCAACTGTTAGCCCAAAAGAATGATGGAATAATATTGGTTGGGGTGGCGGGTCCTTCAGGAGCTGGGAAGACTATATTTACCGAAAAGATACTCAACTTCATGCCCAGCATTGCTGTCATTTCAATGGATAATTACAACGATGCTAGTCGAATTGTTGATGGCAACTTTGATGATCCACGCTTAACTGACTATGATACATTGCTCCAGAATTTACAAGATTTAAAGGAAGGGAAGACGGTCCAGGTTCCGATATATGATTTCAAGTCCAGTTCACGCGTAGGATACAGGACTGTAGAAGCACCGAGTTCCCGTATTGTGATTATTGAGGGTATCTATGCCTTGAGTGAGAAGTTGCGAACATTGCTGGACCTTCGAGTTTCTGTTACAGGTGGAGTTCACCTTGACCTTGTAAAGCGAGTGATACGTGACATACAACGTGCAGGCCAAGAACCCGAAGAAATTATTTATCAAATATCTGAGACGGTATATCCAATGTACAAGGCTTTTATTGAGCCAGATCTTCAGACGGCTCATATAAAAATCATTAACAAATTTAATCCATTTACTGGATTCCAGAGCCCTACTTATATATTAAAGTCAGCAAGAAATGTAGCAGTTGATCAAATTAAAGCTGTTCTCTCTGAAGATTTTAAGGAAACAACTGAGCAAACTTATGACATATATCTTCTACCTCCTGGTGAAGATCCAGAAACATGCCAATCGTATTTAAGGATGCGAAACAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAGTCCCTTTGTCATATCACCGAGAATTACTTTTGAGGTCAGTGTGCGCCTCCTTGGTGGACTAATGGCCTTGGGATATACGATAGCTACTATCCTTAAGAGAAACAGTCATGTCTTTTCTGATGATAGGGCTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTACAAGGGAGAGATCGGTTGGTTTTGAAAGACATAGGAGATCAGCTGGGTCTCGAAGGTTCCTACATTCCTCGTACATACATTGAGCAAATTCAACTCGAAAGGCTCGTGAATGAGGTTATGGCCCTACCAGATGATTTGAAGACAAAGCTCAGCCTAGATGAGGATTTGGTTTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCTGACATGGTTGCCCTGAGAAATAAGAATATGAGGAGTGGATTGTCTCAGTCATATACAAATCAAAGGGACAAAAATGCAGCCAAAGTTAATGGATATTTTTCCAACAATCGGGGTTTTGGGGAAAGAAATTCAGATTCCTCAACAACACTAGTAAATAAGGGAGCTATTAGTCAGCTTTCAGAACAGATTTCTGCCCTCAATGATAGAATGGATGAATTTACAAATCGTATTGAAGAGCTGAATTGCAAGCTAACCTTTAAGAATAATTCTCCAAGCCAGCAAAATATGTCAGCTCAAGCTGAAGCCTGCAATGGTTCTGCTCCAACGTCTTACTTCATTAACAGTTTGGGCAATGGTAGCTTAACTGGTTCTAAGATTTCACATTCCTCGTCTTCATCACAATTAAATAAGGACTCTCCCTTAATGGATGAGATATCTGGCATTGCACGTGGTCAACGTCAAATCATGCATCAAATGGACAATCTCAATAATCTTCTCCGGGGTAGCTTGGGGGAGAAGTCTCAGCAAACAAGAACCAACAAGAAAAACATAACAACAGATTCAAATTCCATTGCAGCTACCGTTATCGTGGTAGTCGCAGTTGGTTGTTTGGGGATCTTCTTGATGAAAGGTTTGTTGACCCGAAAGTGA 2064 0.406 MKQETATPESQIASRKRKEIKSGLMANNTSNSDSHHKRLGLLKDQVHLVKRKDSNRYVISSIQDQLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTIFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLQDLKEGKTVQVPIYDFKSSSRVGYRTVEAPSSRIVIIEGIYALSEKLRTLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIYQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSARNVAVDQIKAVLSEDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDSPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRACVKLDWLEQLNRHYVQVQGRDRLVLKDIGDQLGLEGSYIPRTYIEQIQLERLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADMVALRNKNMRSGLSQSYTNQRDKNAAKVNGYFSNNRGFGERNSDSSTTLVNKGAISQLSEQISALNDRMDEFTNRIEELNCKLTFKNNSPSQQNMSAQAEACNGSAPTSYFINSLGNGSLTGSKISHSSSSSQLNKDSPLMDEISGIARGQRQIMHQMDNLNNLLRGSLGEKSQQTRTNKKNITTDSNSIAATVIVVVAVGCLGIFLMKGLLTRK* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2257 687 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 22 678 - -
Mtr4g2257 687 SUPERFAMILY CYTH-like phosphatases 289 431 IPR033469 -
Mtr4g2257 687 PRINTS Uridine kinase signature 89 106 - -
Mtr4g2257 687 PRINTS Uridine kinase signature 156 171 - -
Mtr4g2257 687 PRINTS Uridine kinase signature 212 222 - -
Mtr4g2257 687 PRINTS Uridine kinase signature 248 261 - -
Mtr4g2257 687 MobiDBLite consensus disorder prediction 1 36 - -
Mtr4g2257 687 CDD UMPK_like 91 263 - -
Mtr4g2257 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 260 IPR027417 -
Mtr4g2257 687 PANTHER URIDINE KINASE 22 678 - -
Mtr4g2257 687 Coils Coil 527 561 - -
Mtr4g2257 687 Gene3D - 90 282 IPR027417 -
Mtr4g2257 687 ProSiteProfiles CYTH domain profile. 272 434 IPR023577 -
Mtr4g2257 687 Pfam Phosphoribulokinase / Uridine kinase family 92 260 IPR006083 GO:0005524|GO:0016301
Mtr4g2257 687 Pfam CYTH domain 277 428 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2257 Mtr-Chr4 36047306 36058502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2257 90 260 PRT Gene Family AT5G40870 26.667 1.02e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2257 K00876 - gmx:100797542 1123.23