Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2253 ATGAAGGATGCAGATGTCTCAAAGCAAATTCAGCAGATGATTAGGTTCATCCGCCAAGAAGCTGAGGAGAAAGCTAATGAAATATCTGTTGCCGCAGAGGAAGAATTCAATATTGAGAAGCTACAATTACTTGAAGCTGAAAAAAGGAAGATCAGACAAGAGTACGAGCGAAAAGCCAAACAGATTGATGTTCGTCGAAAAATTGAATACTCGATGCAGCTGAATGCATCTCGTATAAAGGTACTCCAAGCACAGGATGAGGTGGTGAATTCTATGAAAGATGATGCTAAAAAGGCACTTTTACACATCTCAAATGATGAACAAGTATACAAGAAACTCATCAAAGAAATAATTGTTCAGGGTTTACTACGCCTGAGGGAACCATCTGTGCTACTACGATGTAGAGAGGGTGATAGTAAGCTTGTTGAGTCGTTGCTAGAGGATGTCAAAAAAGAATACTCAGAGAAAGCAAACGTGCAACCCCCTAAGATTGCCCTTGATGATCGTGTTTATCTCCCACCTCAACCAAAAGATGGCAATGTGGATACGCATGAACCTTTTTGTTCTGGAGGAGTAGTATTGGCCTCAGAGGATGGAAAGATAGTGTTGGAAAATACTCTTGACGCGCGACTTGATGTCATTTTTCGACAAAAGTTGCCCGAGATACGAAAGCGTTTGTTAGCGTAA 687 0.4105 MKDADVSKQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAKQIDVRRKIEYSMQLNASRIKVLQAQDEVVNSMKDDAKKALLHISNDEQVYKKLIKEIIVQGLLRLREPSVLLRCREGDSKLVESLLEDVKKEYSEKANVQPPKIALDDRVYLPPQPKDGNVDTHEPFCSGGVVLASEDGKIVLENTLDARLDVIFRQKLPEIRKRLLA* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2253 228 Gene3D - 92 228 IPR038495 -
Mtr4g2253 228 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 ISOFORM X1 1 227 - -
Mtr4g2253 228 Coils Coil 38 61 - -
Mtr4g2253 228 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Mtr4g2253 228 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Mtr4g2253 228 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
Mtr4g2253 228 Gene3D - 1 62 - -
Mtr4g2253 228 Coils Coil 7 34 - -
Mtr4g2253 228 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2253 Mtr-Chr4 36005017 36008147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2253 1 228 Primary Pumps ATPases(2) AT3G08560 69.737 2.17e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2253 K02150 - gmx:100791813 385.956