Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2226 ATGGCTATTTGGTTAAAAACTCTCATCCATGTGTTCTTGTTCTGCTTTTTAATTACAGTTGAAATTGCGGAAACTAGTTTTCATGATGACCCATGCAAAGAATCAAGTTGTGATGGTATTCATGGACCATTCATAAGATTCCCGTTCAGACTCAAAGGAAGACAGCCACAATGGTGTGGCCACAATGATTCCTGGTATGAACTATACTGCACCGACACCAACCAAACGGTGTTAGAGCTTCCCTTCTCTTCGAAAACCATCCTCAAAACCATAAACTACACTTCACAAATTATAACAGTATCTTATCCTGAATTCTGCCTTCACAAACAGATTCCTAACTTCAACATATCCTCATCACCTTTTCAGTTCAATTACGAATTTGGACTCAACCAGTATGCTTTATTCAATTGTTCAGCAACTTCTCACAGAAAAACATATTATACATATTATAATATATTAACATCTGGAAACTTTTCTTGTCTCAACGTGCCGGGATTTGAAGTTATAGCGGTGCAATCCATATCATCAATAATCGGGACACCCTTGTTGTCCTGTACCAGAATCCAAGACCTTGTATTGTTGCCTAATTCTTTGTTTAACAACAACGTTGATGCGGGTCTCAATTGGTTTCAACCAGACTGCAGAAACTGTGAGCGAAAAGGTGGGCAATGCAAGGCCAACAGATACGCATCTCAACATGAATTTGATTGCATAGGCATCGATAAAGGTCTATCAAAAGGGAAAGTGATTGCTGGTGGAATACTAGGCCCATTTTCTCTTATATTTGTTGGAGTCACAGTCTATTGTATCTATGTAGCTTGCATTGAAAGGAAGAATTACATAAGAATCAAAAAGTTTTTGAAATATTATAAAGCTCTTAAGCCTTCCAGGTACTCTTATGCAGATATAAAAAGAATCTCAAATCAGTTTAAGGAAGAACTGGGGCAGGGAGCTTTTGGATCTGTCTTCAAAGGAAAACTCTCAAACGAAGTTCAGGTAGCTGTTAAAGTTCTAAACACTTCAACAGGAAATGGCCAAGAGTTCATCAATGAAATGGAAGCAATGTGTCAAATTCACCACGTCAACGTGGCTCGCTTGGTTGGTTTTTGTGCAGATGGAAACAAACGAGCCTTGGTGTATGAATTTTTACCAAAAGGTTCGTTGCAGAATTTCATATCATCTGCAGACAATAAGGATGTCTTTTTAGGTTGGGATAGGCTTCAAAACATTTCTCTTGGTATAGCGAAGGGAATTGAGTATCTTCATCAAGGTTGTGATAAACGAATTCTCCATTTTGATATCAAACCTCATAACGTATTGCTAGACGACAATTTCACACCCAAAATTTCTGATTTTGGTTTGGCAAAACTTTGTTCCAAAGAAAGAAGTATTGTGTCAATGACCACGGCTAGGGGAACTTTGGGCTACATTGCGCCAGAGGTATTTTCTAGAAACTTTGGCATTGTATCCTATAAGTCAGATGTTTATAGTTATGGGATGCTGCTTCTTGAAATGGTTGGAGGAAGGAAAGTAACCGATGTCACGGATGAGAATAACAATCATGTTCACTATCCACAATGGATTTATAATCTTCTAGAGAACAATGAAGATATAAAAATCGATATAGAAGGAGAAGAAGACACTAGAATTGCAAAGAAGCTATCAATCGTGGGACTTTGGTGCATTCAGTGGCATCCGGTGAATCGTCCGACCATGAAGGTTGTGGTTCAAATGTTGGAAGGAAATGGTGAGAAGTTAGAGATGCCACCTAATCCTTTTGCACCTTCATCTGCAACTGCAACTAGAACATGTGCTAGACGTCTCAACCTGGAGCTAGATGTCATCTCAGAAATAGAGTGA 1860 0.3871 MAIWLKTLIHVFLFCFLITVEIAETSFHDDPCKESSCDGIHGPFIRFPFRLKGRQPQWCGHNDSWYELYCTDTNQTVLELPFSSKTILKTINYTSQIITVSYPEFCLHKQIPNFNISSSPFQFNYEFGLNQYALFNCSATSHRKTYYTYYNILTSGNFSCLNVPGFEVIAVQSISSIIGTPLLSCTRIQDLVLLPNSLFNNNVDAGLNWFQPDCRNCERKGGQCKANRYASQHEFDCIGIDKGLSKGKVIAGGILGPFSLIFVGVTVYCIYVACIERKNYIRIKKFLKYYKALKPSRYSYADIKRISNQFKEELGQGAFGSVFKGKLSNEVQVAVKVLNTSTGNGQEFINEMEAMCQIHHVNVARLVGFCADGNKRALVYEFLPKGSLQNFISSADNKDVFLGWDRLQNISLGIAKGIEYLHQGCDKRILHFDIKPHNVLLDDNFTPKISDFGLAKLCSKERSIVSMTTARGTLGYIAPEVFSRNFGIVSYKSDVYSYGMLLLEMVGGRKVTDVTDENNNHVHYPQWIYNLLENNEDIKIDIEGEEDTRIAKKLSIVGLWCIQWHPVNRPTMKVVVQMLEGNGEKLEMPPNPFAPSSATATRTCARRLNLELDVISEIE* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2226 619 Gene3D Phosphorylase Kinase; domain 1 281 382 - -
Mtr4g2226 619 Gene3D Transferase(Phosphotransferase) domain 1 383 588 - -
Mtr4g2226 619 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Mtr4g2226 619 ProSiteProfiles Protein kinase domain profile. 308 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2226 619 PANTHER RUST RESISTANCE KINASE LR10-RELATED 26 618 IPR045874 GO:0004672
Mtr4g2226 619 SUPERFAMILY Protein kinase-like (PK-like) 291 580 IPR011009 -
Mtr4g2226 619 SMART serkin_6 308 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2226 619 PANTHER RECEPTOR-LIKE KINASE 26 618 - -
Mtr4g2226 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Mtr4g2226 619 Pfam Protein kinase domain 310 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2226 619 Pfam Wall-associated receptor kinase galacturonan-binding 32 101 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2226 Mtr-Chr4 35671489 35673893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2226 47 618 Receptor kinase-like Gene Family AT1G66910 38.669 2.02e-114 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr4g2226 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2226 - - mtr:MTR_4g073230 1243.41