Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2225 ATGGCTATGATGTACGGGGTACTACCCATTTTCGCTGCCATTTTAATATTGATCTCTGTGATTTCCTTCTATGATACAAGCTTCATTCAAAGCCCATGCGGAACGATATTCAACGATGTTAAATTTGGAGATGGGATTGGGTGTAATCCCAGTTTCCAAGTAATATGTGAAAACAACAAATCGGTAGTGTACTTCAACTATGGCGAACATCAAACCGAGGCCATTATAGCTTCTGATTCATCCTCATCCTCCTCCTCCTCTTCATTTCGTTACATCATCACTGGAGTTAGTCCTCATAACAACTGCCCTACCATTAATTCCCTATCTCTTCCGTATGAAAACATCTCCTTCTATACCTTCTTACCCGAACCATCATTGGCTGTTGTGAGATGTGAAAAACCAGTAGGTTATCCGGAAGACTATTGGGATATATCTTCGGAGAGGTGTGGTGGTGAGGAAAAGCAATACTATTCTTATTTTGTTAACGGACGTGAAGACGTGAGTAACATAGTAGAGTCATGCAGAGTGGAGATGAAGGTAATTATGAGTAGCTGGGATGGAAAGCTGAAATGTAATAGCAGCAAGTGTGGTTATCCAGATGTATACAGGGAGTATGTCAACGGAATTGAGCTTCGTTGGCGACCAAAACGCTGTGAACAGCATCAGCAAGACAGAGACCGTGACCGGGAAGAGGAACAATTGTCATACCCCAGCATGATATACGATACAGCAATGGGCGCTCTATTTTTCTTCATTCTCTTGCTGCTCTCATGGACTGCTGTAAAATTTGTTTTTGGGTCACCATTCGTGGTTGCGGTCTTGATATGTAAATGGAGAAAAAAACATTTATCTATAGATGACATGGTTGAAGATTTTATTCAGAGTCACAACAATTTCATGCCCATAAGGTACTCTTACTCTCAAATTAAAACTATGACCAAACATTTCAAACATAAGTTGGGTGAAGGAGGCTACGGTTCAGTCTATGAAGGAGTGTCACGAAGCAAACACAAAGTAGCTGTTAAGGTATTGACCAAGTCTCAAACCAATGGACAAGACTTCATCAATGAAGTTGCAACCATTGGAAGAATTCGTCATGTGAACGTGGTGCAACTGGTTGGATTCTGTGCTGAAAGAACAAAGCAAGCTCTGGTTTACGAGTTCATGCCTAATGGTTCTCTTGATAAACACATGTTTTCACATGAGCAAGGACACTTGTCGTCGTTAAGCTACGAGAAAATCTACGACATTTCTCTTGGAATTTCCCGTGGAATTCAATACTTACATCAAGGTTGTGACATGCAAATCATACACTTTGATATAAAACCTCATAACATTCTTCTTGACGAGAATTTTGACCCAAAGATATCTGACTTTGGTTTGGCGAAGTTGTACCGAACAGATCAAAGTATTTTAACTTTAACAGCGGCAAGAGGAACAATGGGGTACATGGCTCCTGAGTTGTTATACAAGAACATTGGAAACATCTCTCACAAAGCTGATGTTTATAGTTTTGGAATGATGCTAATGGAAATGGCAGGTAGAAAAAAGAACAAAAGTTACATAGAGAATTATTGGCAAGACTACTTTGCTAGATGGGTTTATGATCAATTTGAGGAAACAATAGATACAAACAATGGTACAGAGGAGGAAAAGAAAATTGCAATGAAGATGATTGTGATTGCGTTGAAATGCATACAAATGAAACCAGATGATCGTCCCTCAATGAATGAAGTGATAGATATGCTTGAAGGAGATGAAGTTCCACAGCACCTTCCACCTGATCCTCAATCTCTCTTAACTTGGCAAAGGATGTCAGTAGAGGAGGTGCAATCACCAAGTGAGTGA 1848 0.3999 MAMMYGVLPIFAAILILISVISFYDTSFIQSPCGTIFNDVKFGDGIGCNPSFQVICENNKSVVYFNYGEHQTEAIIASDSSSSSSSSSFRYIITGVSPHNNCPTINSLSLPYENISFYTFLPEPSLAVVRCEKPVGYPEDYWDISSERCGGEEKQYYSYFVNGREDVSNIVESCRVEMKVIMSSWDGKLKCNSSKCGYPDVYREYVNGIELRWRPKRCEQHQQDRDRDREEEQLSYPSMIYDTAMGALFFFILLLLSWTAVKFVFGSPFVVAVLICKWRKKHLSIDDMVEDFIQSHNNFMPIRYSYSQIKTMTKHFKHKLGEGGYGSVYEGVSRSKHKVAVKVLTKSQTNGQDFINEVATIGRIRHVNVVQLVGFCAERTKQALVYEFMPNGSLDKHMFSHEQGHLSSLSYEKIYDISLGISRGIQYLHQGCDMQIIHFDIKPHNILLDENFDPKISDFGLAKLYRTDQSILTLTAARGTMGYMAPELLYKNIGNISHKADVYSFGMMLMEMAGRKKNKSYIENYWQDYFARWVYDQFEETIDTNNGTEEEKKIAMKMIVIALKCIQMKPDDRPSMNEVIDMLEGDEVPQHLPPDPQSLLTWQRMSVEEVQSPSE* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2225 615 ProSiteProfiles Protein kinase domain profile. 314 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2225 615 SUPERFAMILY Protein kinase-like (PK-like) 291 584 IPR011009 -
Mtr4g2225 615 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Mtr4g2225 615 PANTHER RUST RESISTANCE KINASE LR10-RELATED 97 596 IPR045874 GO:0004672
Mtr4g2225 615 Gene3D Phosphorylase Kinase; domain 1 289 388 - -
Mtr4g2225 615 Gene3D Transferase(Phosphotransferase) domain 1 389 591 - -
Mtr4g2225 615 Pfam Protein kinase domain 316 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2225 615 SMART serkin_6 314 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2225 615 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 97 596 - -
Mtr4g2225 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2225 Mtr-Chr4 35653632 35671290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2225 303 596 Receptor kinase-like Gene Family AT5G38280 51.155 1.40e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr4g2225 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2225 - - mtr:MTR_4g073220 1226.46