Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2224 ATGACAGTTGAAAAGAGGTTTGTGTTGGTTGGGATTAGAATAGATAGCCATAGCAGACAGCTTCTCAATTGGGCTATTGTTAAAGTTGCTGAACCTGGTGATTGTGTTATTGCTGTTCATGTAGTTAAAACTAAAAGCTCAGATTATGTTTCTAAAAACAAGAGCCTAATAGATGGATATTTAGAGGTTTATGAAGGCTTGTGTGATGTGAAAAAGGTTGGTCTTTCTAGTCAAATCATAACAGGGAAGTCCATTAAAAACATTCTTGTTAGAGAAGCAAAAAACCAGGATGCTTTGGCTTTAGTGGTAGGGGGTAACGCTGCCACAGCCAAATATTGCGCCAAACGTCTTCCACCCACCACCAATGTTCTAGCCATCCAAGATTCAAGAATCGTCTTCGGGAGGTGCAACAATAAACGACCACCAGGTAGTCTTATATTAGATCCAAGGTCAAGTTTAACAAGTATAGATAACCTGAGTGAGGAATCACCACACCAAAACATCAAGGAATCGAAAGAAGAAACATTTGACGAATCAGAAAGGCACAAGTCACGATCGATATCCATGTTTGCAGACGATCCTTCTAAGAGGAAGCTTGGATGGCCTCTACTCCGCAAATCGAATTCAGACATCTCACATAGTCATCATGGAAAGGGTATTTCGGTAGTACAATGGGTAATGAGCTTACCAGATCGTTCACCGCGTAGTAGTCCTCAATCATCTTCCTCAGACGAAAATCCATTCGAGAGGAGCATAAGTGACAGTCTTGAGGACGAGAGCTTCAAAAATCATTTACCTACATCAGTTGTACTCCCAAAAGTCCTAGAAGGGATATTGAATGTAAATTCACTCAATTGCAAGTGGCTCAGCCTTGAGTCTCTCAAGTCTTGTACTAGTCAATTCTCTTCAGAAAATTTGATTGGGAAAGGAGGAAGCAACCGTGTGTATAAAGGAATTCTCCCTGATGGAAAACCAATTGCAGTTAAAGTATTGCGATCATCAAAAGAAGCATGGAAAGATTTTGCCTTTGAGATGGAAATAATATCATCATTGAAGCACAAAAACATTACTCAACTACTTGGAATTTGCATAGAGAACAATACTTTAATATCTGTTTATGAGTATTTCCCTAAAGGAAGCTTAGAGGAAAATCTACATGGAAAAAACAATGATGGATCTCTTTTGTCATGGGAAGTGAGATTTAATGTAGCTGTTGGAGTAGCTGAGGCCCTTGATTACCTACACACAGAAGCTTCGAAGCATGTCATACATAGAGATGTCAAGTCTTCAAACATTCTTCTTTCCAAGGAGCTTGAGCCACAATTGTCTGATTTTGGACTTGCAATATGGGGACCAACAACAACATCCTTTTTGACACAAGAAGATGTAGTCGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAAGTTAGTGACAAGATAGATGTCTATGCCTTCGGTGTAGTGCTACTTGAACTAATATCAGGTAGGGAACCGATCAGCTCTGAACCTTGCAAAGGACAAGAGAGCTTGGTAGCTTGGGCAAAACCAATAATAGAGAGTGGAGATATTAAAGGTTTGTTGGACCCAAAATTAGAAGGGAAGTTTGATGAGACCCAAATGAAAAGAATGGTTTTGGCAGCATCTTTATGCATCGCACGGGCTGCTAGACTTCGTCCTAAATTTAATCAGATACTGAAGATCCTAAAAGGGAACAATGAAGATGAATATTGCTTCAATGAGTATTCAGAGAATGAAGAAAACATCGATGATGAAGTGTATCCAAATTCAAGTACAGAGTTACACCTAACTCTTGCATTACTTGGTGTTGATGATGACAATACATCATGTAGTAGTACAGACCATAGCTATAGTGAGAATTTGAAAGATCAATGGAGCAGGTCTTTGAGTTTTAACTAA 1929 0.3914 MTVEKRFVLVGIRIDSHSRQLLNWAIVKVAEPGDCVIAVHVVKTKSSDYVSKNKSLIDGYLEVYEGLCDVKKVGLSSQIITGKSIKNILVREAKNQDALALVVGGNAATAKYCAKRLPPTTNVLAIQDSRIVFGRCNNKRPPGSLILDPRSSLTSIDNLSEESPHQNIKESKEETFDESERHKSRSISMFADDPSKRKLGWPLLRKSNSDISHSHHGKGISVVQWVMSLPDRSPRSSPQSSSSDENPFERSISDSLEDESFKNHLPTSVVLPKVLEGILNVNSLNCKWLSLESLKSCTSQFSSENLIGKGGSNRVYKGILPDGKPIAVKVLRSSKEAWKDFAFEMEIISSLKHKNITQLLGICIENNTLISVYEYFPKGSLEENLHGKNNDGSLLSWEVRFNVAVGVAEALDYLHTEASKHVIHRDVKSSNILLSKELEPQLSDFGLAIWGPTTTSFLTQEDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSEPCKGQESLVAWAKPIIESGDIKGLLDPKLEGKFDETQMKRMVLAASLCIARAARLRPKFNQILKILKGNNEDEYCFNEYSENEENIDDEVYPNSSTELHLTLALLGVDDDNTSCSSTDHSYSENLKDQWSRSLSFN* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2224 642 PANTHER OS08G0249100 PROTEIN 3 623 - -
Mtr4g2224 642 Gene3D Phosphorylase Kinase; domain 1 275 375 - -
Mtr4g2224 642 MobiDBLite consensus disorder prediction 156 191 - -
Mtr4g2224 642 MobiDBLite consensus disorder prediction 230 252 - -
Mtr4g2224 642 ProSiteProfiles Protein kinase domain profile. 301 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2224 642 MobiDBLite consensus disorder prediction 163 191 - -
Mtr4g2224 642 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 3 623 - -
Mtr4g2224 642 SUPERFAMILY Protein kinase-like (PK-like) 283 572 IPR011009 -
Mtr4g2224 642 Gene3D Transferase(Phosphotransferase) domain 1 376 589 - -
Mtr4g2224 642 MobiDBLite consensus disorder prediction 230 249 - -
Mtr4g2224 642 Pfam Protein kinase domain 302 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2224 642 SMART serkin_6 301 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2224 642 CDD USP_Like 8 104 - -
Mtr4g2224 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2224 Mtr-Chr4 35645810 35649913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2224 289 641 Trihelix Transcription Factor Family AT1G70460 38.268 1.37e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr4g2224 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2224 - - gmx:100789189 941.414