Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2223 ATGGAAGACGGTGAACTTGATTTCTCGAATCAAGATGTTTTTTCGAGTCCTAACATGGGTGAATTTCAAACAAGTGGTTCAATGGATAGTTTTTTTGATGAATTGTTGAAGGATACACACGCCTGTACTCATACCCACACGTGTAACCCACCTGGTCCTGATTTTTCACACACTCACACCTGTTATCATGTTCACACCAAGATTGTCCCTGCTGAAGATGATCAGGTTGGGACTGATGATACTGCTGAATCTGCTGAGAAGAAGTCCAGTAAGAAGCGGCCCGTTGGGAATAAAGAAGCGGTTAGGAAGTATCGCGAGAAGAAGAAAGCTAGGGCTGCGTCGTTGGAGGATGAGGTGATGAAATTGAGGGCTTTGAATCAGCATTTGATGAGGAAGTTGCAGGGTCAGGCTGCTTTGGAGGCGGAAGTTGCGAGGTTGAAGTGTTTGTTGGTTGATATTAGGGGGAGGATTGAAGGGGAAATTGGGTCGTTTCCGTATCAGAAACCGGCGAATGTGAATCCCGCTATGAATATGCCTGGTTCTCATGTGATGAACCCTTGTAATGTGCAGTGTGATGATCGGGCATATTGCCTTCGTCCAGATGGGAAGATTGCTGCTGAAGTGGCGTCGCCGAATGAGGAAGGATTCGATGGTTGTGAGTTTGAGAGTCTCCAGTGTATGGGAGGCCAGAATTTGGGGCTCAAGGATCTTCGTGGTTGTGGAGGTGGACCGGCGTTGTCTAATGTCAATTCACAAGCTTCCAGTAAAAGAAAAGGGGGGTCTCGTGCAGCCAAAGCCGGGTGA 804 0.4751 MEDGELDFSNQDVFSSPNMGEFQTSGSMDSFFDELLKDTHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAEDDQVGTDDTAESAEKKSSKKRPVGNKEAVRKYREKKKARAASLEDEVMKLRALNQHLMRKLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKPANVNPAMNMPGSHVMNPCNVQCDDRAYCLRPDGKIAAEVASPNEEGFDGCEFESLQCMGGQNLGLKDLRGCGGGPALSNVNSQASSKRKGGSRAAKAG* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2223 267 Coils Coil 98 132 - -
Mtr4g2223 267 MobiDBLite consensus disorder prediction 72 109 - -
Mtr4g2223 267 PANTHER BASIC LEUCINE ZIPPER 23 1 238 - -
Mtr4g2223 267 MobiDBLite consensus disorder prediction 72 103 - -
Mtr4g2223 267 Gene3D - 78 153 - -
Mtr4g2223 267 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 238 - -
Mtr4g2223 267 MobiDBLite consensus disorder prediction 1 21 - -
Mtr4g2223 267 MobiDBLite consensus disorder prediction 245 267 - -
Mtr4g2223 267 SMART brlzneu 83 152 IPR004827 GO:0003700|GO:0006355
Mtr4g2223 267 Pfam Basic region leucine zipper 88 142 IPR004827 GO:0003700|GO:0006355
Mtr4g2223 267 SUPERFAMILY Leucine zipper domain 92 135 IPR046347 GO:0003700|GO:0006355
Mtr4g2223 267 CDD bZIP 91 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2223 Mtr-Chr4 35624813 35627367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2223 1 266 bZIP Transcription Factor Family AT4G35040 64.576 6.49e-113 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr4g2223 bZIP_2 5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2223 K25785 - gmx:780549 412.149