Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2215 ATGAGTCATAATGAACCACATATTATATATTTTTGCAAGACAAACCCCGTGAAATTTGCATACCAGAACTTCGCGGTCCCTGCCTCCCTAAGGGTTTTTCGTTTACCTGGTATCATTAGAAGGTCATCATCATTTACTTCAAGCCGATCAGTTTCAAAAGTTGTGGACGTGCCAAAGGGATATCTCGCAGTGTGCGTTGGTGATAAACAAAAGAGATTTGTGATCCCCGTATCATACTTGAACCAACCATTGTTTCAAGATTTGATGAGTCAAGCCGAAGAAGAGTTTGGATATGATCATCCAATGGGAGGTCTCACCATTCCTTGCACAGAAGATGCCTTCAAACATATAACTTATCGCTTGAATGAGATTTGA 375 0.4053 MSHNEPHIIYFCKTNPVKFAYQNFAVPASLRVFRLPGIIRRSSSFTSSRSVSKVVDVPKGYLAVCVGDKQKRFVIPVSYLNQPLFQDLMSQAEEEFGYDHPMGGLTIPCTEDAFKHITYRLNEI* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2215 124 Pfam Auxin responsive protein 44 118 IPR003676 GO:0009733
Mtr4g2215 124 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 37 122 - -
Mtr4g2215 124 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2215 Mtr-Chr4 35562397 35562771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2215 42 117 Calmodulin-binding Proteins AT3G43120 48.684 8.15e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2215 K14488 - gmx:112998536 135.961