Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2214 ATGGGTATGTGTATGCTTCTAGAGATGATTCTACATGCAATGAAAATGTTACGACTACGGTCTCAATACTACACAAAGCATCATTTTTCAAGACAAAATTCCAAGAAAATTGGTCATCATGCTCCAAAAGGACATTTTGTGGTGTACGTGGATGATAAGGATGATGAATATATGAGGCGGTTTGTGGTCCCAATATCGTACTTGAAGCAACCTATGTTTCAGGCCTTGTTGTGTTGTGCTGAGGAAGAGTTTGGTTTTGAACATCCAATGGGAAATATTGTTATTCCATGTTCCATTGACTATTTTGTTACTCTTACTTCTCGTTTCAATGTCTCATAA 339 0.3717 MGMCMLLEMILHAMKMLRLRSQYYTKHHFSRQNSKKIGHHAPKGHFVVYVDDKDDEYMRRFVVPISYLKQPMFQALLCCAEEEFGFEHPMGNIVIPCSIDYFVTLTSRFNVS* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2214 112 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 28 110 - -
Mtr4g2214 112 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 28 110 IPR003676 GO:0009733
Mtr4g2214 112 Pfam Auxin responsive protein 26 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2214 Mtr-Chr4 35558022 35558360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2214 34 102 Calmodulin-binding Proteins AT5G20810 43.478 1.42e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2214 K14488 - cam:101505472 156.762