Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2212 ATGGGTTTTCGTTTACCTGGTATCATTAGAAGGTCATCATCGTTTACTTCAAGCCGATCAGTTACAAAAGTTGTGGACGTGCCAAAGGGCTATCTTGCAGTGTACGTTGGAGATAAACAAAAGAGAATTGTGATCCCCGTATCATACTTGAACCAAACATTGTTTCAAGATTTGCTGAGTCAAGCCGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGCACTGAAGATGCCTTTCAACATATAACTTCTCGCTTGAATGAGCTATGA 285 0.4105 MGFRLPGIIRRSSSFTSSRSVTKVVDVPKGYLAVYVGDKQKRIVIPVSYLNQTLFQDLLSQAEEEFGYDHPMGGLTIPCTEDAFQHITSRLNEL* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2212 94 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 5 92 - -
Mtr4g2212 94 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 5 92 IPR003676 GO:0009733
Mtr4g2212 94 Pfam Auxin responsive protein 14 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2212 Mtr-Chr4 35540022 35540736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2212 12 87 Calmodulin-binding Proteins AT3G43120 48.684 1.28e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2212 K14488 - gmx:112998536 141.739