Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2209 ATGGGTTTTCGTTTACCTAGTATCATCAAAAGGGCATCATCTTCAAAAGGTGTCGATGTTCCAAAGGGATATCTAGCAGTGTATGTTGGAGAGAAAATGAAGCGGTTTGTGATTCCTGTATCATACTTGAACCAAACCTCATTCCAAGAATTGTTGAGCCAAGCTGAGGAACAATTTGAATATGATCATCCAACGGGTGGTCTCACTATTCCTTGCAGAGAAGACGTTTTCTTAGAGATCACTTCTCGTTTGAATTGA 258 0.3992 MGFRLPSIIKRASSSKGVDVPKGYLAVYVGEKMKRFVIPVSYLNQTSFQELLSQAEEQFEYDHPTGGLTIPCREDVFLEITSRLN* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2209 85 PANTHER SMALL AUXIN-UP RNA-RELATED 1 85 - -
Mtr4g2209 85 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
Mtr4g2209 85 Pfam Auxin responsive protein 12 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2209 Mtr-Chr4 35502833 35503317 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2209 19 77 Calmodulin-binding Proteins AT3G43120 54.237 4.37e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2209 K14488 - gmx:100782363 140.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2209 4 35502833 35503317 Mtr4g2209 4 35502833 35503317 ECH