Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2206 ATGGGTTTCCGTTTACACACTATTCTAAAGGGTTCAGTAACAGCTAGACAAACAACATCAAAATCAGTAGAAGTGAAAAAGGGCTATGTTTCCGTGTATGTTGGAGAGAAATTGGCGCGGTTTGTAGTTCCTGTATCATACTTGAACCAACCTTCATTTCAAGACTTGTTGAGTCAAGCCGAGGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACCATTCCTTGCACCGAAGATGTCTTCCAACACATAACTTCTTGCTTGAATGGACTATGA 279 0.4158 MGFRLHTILKGSVTARQTTSKSVEVKKGYVSVYVGEKLARFVVPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQHITSCLNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2206 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Mtr4g2206 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Mtr4g2206 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2206 Mtr-Chr4 35480636 35481176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2206 9 91 Calmodulin-binding Proteins AT3G43120 42.529 2.74e-19 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2206 4 35480636 35481176 Mtr4g2206 4 35480636 35481176 ECH