Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2204 ATGGGTTTCCGTTTACATGCTACTCTAAGGGCATCAGTAACTGCTAGACAAGCATCATCAAAATCTGTAGAAGTTCCAAAGGGCTATGTTGCAGTGTATGTTGGAGATAAACAAAAGCGGTTTGTGATCCCTATCTCATACTTAAACCAACCATTGTTTCAATATTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCACAGGTGGCCTCACCATTCCTTGCACTGAAAATGTCTTCCAACGCATAACTTCTCGCTTGAATGGGCTATAA 279 0.4122 MGFRLHATLRASVTARQASSKSVEVPKGYVAVYVGDKQKRFVIPISYLNQPLFQYLLSQAEEEFGYDHPTGGLTIPCTENVFQRITSRLNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2204 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 8 90 - -
Mtr4g2204 92 Pfam Auxin responsive protein 13 89 IPR003676 GO:0009733
Mtr4g2204 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2204 Mtr-Chr4 35474124 35474837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2204 14 83 Calmodulin-binding Proteins AT3G43120 50.000 4.98e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2204 K14488 - gmx:100816803 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2204 4 35474124 35474837 Mtr4g2204 4 35474124 35474837 ECH