Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2203 ATGGCTATTCGTTTGCCTTTAATAATGCAAGCTAAGAAGCATATCCTCTCCCGCACGCTTACAATCCGAAAAAAAGTGTTATCAGTTAATAATATACCAAAAGGGTATCTGGCGGTATATGTTGGAGAAGAGAAAAAGAAGAAATATGTTGTTCCAATATCATACTTGCATCAACCTGCTTTTCAACAATTGCTAGGTAAAGCTGAAGAAGAGTTTGGATTTAATCATCCAATGGGTGGTCTCACCATTCCTTGCAGAGAAGATATTTTTGTTACAGTCACTTCTCAATTGGAAGTTTAA 300 0.3633 MAIRLPLIMQAKKHILSRTLTIRKKVLSVNNIPKGYLAVYVGEEKKKKYVVPISYLHQPAFQQLLGKAEEEFGFNHPMGGLTIPCREDIFVTVTSQLEV* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2203 99 PANTHER SMALL AUXIN-UP RNA-RELATED 24 98 - -
Mtr4g2203 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 24 98 IPR003676 GO:0009733
Mtr4g2203 99 Pfam Auxin responsive protein 26 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2203 Mtr-Chr4 35472032 35472992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2203 31 90 Calmodulin-binding Proteins AT3G43120 51.667 8.39e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2203 K14488 - qsu:112040181 125.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2203 4 35472032 35472992 Mtr4g2203 4 35472032 35472992 ECH