Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2202 ATGGGTTTCCGTTTACCAAGTATCATCAGATCAAGGGCATCATCTTCAAAAGCTGTGGACGTTCCAAAGGGATATCTAGCAGTGTACGTAGGAGAGAAAATGAAGCGGTTTGTGATCCCTTTATCATACTTAAACCAACCATCGTTTCAAGAATTGTTGAACCAAGCTGAAGAACAATTTGAATATGATCATCCAATGGGTGGTCTTACTATTCCTTGCAAAGAAGACATTTTCTTAGATATTACTTCTCACTTGAATTGA 261 0.3793 MGFRLPSIIRSRASSSKAVDVPKGYLAVYVGEKMKRFVIPLSYLNQPSFQELLNQAEEQFEYDHPMGGLTIPCKEDIFLDITSHLN* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2202 86 Pfam Auxin responsive protein 13 83 IPR003676 GO:0009733
Mtr4g2202 86 PANTHER SMALL AUXIN-UP RNA-RELATED 1 86 - -
Mtr4g2202 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2202 Mtr-Chr4 35463626 35464236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2202 20 78 Calmodulin-binding Proteins AT3G43120 54.237 5.29e-18 71.6