Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2198 ATGGGTTTCCATTTCAACTCTATTCTAAGAGGATCGGTAACAGCTAGACAAGCAACATCAAAATCTGTAGAAGTGAGAAAGGGCTATGTTGCGGTGTATGTTGGAGAGAAACTGGTGCGGTTTGTAGTCCCTGTATCATACTTAAACCAACCTTCATTTCAAGACTTGTTGAGTCAATCCGAGGAAGAATTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGCACGGAAGATGTCTTCCAACATATAATTTCTTCCTTGAATGGACTATGA 279 0.4158 MGFHFNSILRGSVTARQATSKSVEVRKGYVAVYVGEKLVRFVVPVSYLNQPSFQDLLSQSEEEFGYDHPMGGLTIPCTEDVFQHIISSLNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2198 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Mtr4g2198 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Mtr4g2198 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2198 Mtr-Chr4 35445040 35445584 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2198 14 91 Calmodulin-binding Proteins AT3G43120 41.026 1.04e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2198 K14488 - gmx:112997793 145.206