Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2195 ATGGGTTTTCGTTTAACCGGTATCATCAGAAGGGCTGCAAACCAAACATCTTCAAAAGGCGTGGATGTGCCAAAGGGATATCTTGCAGTATACGTTGGAGAGGAAATGAAGAGGTTTGTGATCCCAATATCATACTTGAGCCAATCATCATTTCAAGAATTATTGAATCAAGCCGAGGAACAATTCGGATATGACCATCCAATGGGTGGTCTCACAATTCCTTGCAGAGAAGACGTTTTCTTAGATATTACTTCTCGTTTGAATCTGTGCTAA 273 0.4066 MGFRLTGIIRRAANQTSSKGVDVPKGYLAVYVGEEMKRFVIPISYLSQSSFQELLNQAEEQFGYDHPMGGLTIPCREDVFLDITSRLNLC* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2195 90 Pfam Auxin responsive protein 14 86 IPR003676 GO:0009733
Mtr4g2195 90 PANTHER SMALL AUXIN-UP RNA-RELATED 3 88 - -
Mtr4g2195 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2195 Mtr-Chr4 35421426 35422081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2195 15 80 Calmodulin-binding Proteins AT3G43120 56.061 8.05e-22 81.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2195 4 35421426 35422081 Mtr4g2195 4 35421426 35422081 ECH