Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2188 ATGGGTTTCCGCATAGCAAAGCTTATCAGAATGCCATCATTTTCGTCAACACAAGCATCTAGTAAAGGATTCGAAGTCCCAAAAGGCTATCTCGCAGTCTATGTTGGAGATCAAATGAGGCGGTTTGTGATTCCAGTATCATACTTGAACCAACCTTCATTTCAAGAATTGCTAAATCAATCTGAAGAAGAATATGGATATGATCATCCAATGGGTGGTCTTACCATTCCGTGCAGCGAGGATGAATTCCGAAACCTCACTTCTCGCATGAATTGA 276 0.413 MGFRIAKLIRMPSFSSTQASSKGFEVPKGYLAVYVGDQMRRFVIPVSYLNQPSFQELLNQSEEEYGYDHPMGGLTIPCSEDEFRNLTSRMN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2188 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 91 - -
Mtr4g2188 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Mtr4g2188 91 Pfam Auxin responsive protein 14 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2188 Mtr-Chr4 35401162 35402054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2188 15 86 Calmodulin-binding Proteins AT3G43120 50.000 1.21e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2188 K14488 - gmx:100786095 156.377