Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2185 ATGGGTTTCCGCATAGCAAAGCTTATCAGAAAGCCATCATTTTCGTCAACACAAGCATCTAGCAAGGGATTTGAAGTGCCAAAAGGCTATCTTGCAGTCTACGTTGGAGATAAAATGAGACGGTTTGTGATTCCTGTATCATACTTGAACCAACCCTCATTTCAAGAATTACTAAATCAATCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTTACAATTCCGTGCAGTGAAGATGAATTCCAAAACCTCACTTCTCGCATGAATTGA 276 0.3949 MGFRIAKLIRKPSFSSTQASSKGFEVPKGYLAVYVGDKMRRFVIPVSYLNQPSFQELLNQSEEEFGYDHPMGGLTIPCSEDEFQNLTSRMN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2185 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 91 - -
Mtr4g2185 91 Pfam Auxin responsive protein 13 88 IPR003676 GO:0009733
Mtr4g2185 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2185 Mtr-Chr4 35390929 35391866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2185 15 86 Calmodulin-binding Proteins AT3G43120 48.611 1.09e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2185 K14488 - gmx:100786095 160.229