Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2183 ATGTCACTCACTGGGCCATATCACAGCTCATTGATTAATTGGTTTGTATATGCTAGCAACTATATATACACTATTTCATTGGACTCTCAAGCAACACAAATCTTTTACATCCTAAATTATCATAATTCAAATTTTCTTTTCCCAACCAATCCTCTAACCATTAAAAAGACCATGGGTTTCCGCATAGCAAAGCTTATTAGAATGCCATCATTTTCCAAAACACAAGAATCTACCAAGGGACTTGAAGTCCCAAAAGGCTATCTCGCAGTCTATGTTGGAGATAGAATGAGACGGTTCGTGATTCCAGTATCATACTTGAACCAACCATCGTTTCAAGAATTACTAAATCAAGCAGAAGAAGAATTTGGATATGATCATCCTATGGGTGGTCTCACAATTCCTTGCAGCGAGGATGAATTCCAAAACCTCACATCTCGTTTGAGTGAACTGTAA 453 0.3753 MSLTGPYHSSLINWFVYASNYIYTISLDSQATQIFYILNYHNSNFLFPTNPLTIKKTMGFRIAKLIRMPSFSKTQESTKGLEVPKGYLAVYVGDRMRRFVIPVSYLNQPSFQELLNQAEEEFGYDHPMGGLTIPCSEDEFQNLTSRLSEL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2183 150 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 58 148 IPR003676 GO:0009733
Mtr4g2183 150 PANTHER AUXIN-INDUCED PROTEIN 10A5 58 148 - -
Mtr4g2183 150 Coils Coil 133 150 - -
Mtr4g2183 150 Pfam Auxin responsive protein 70 146 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2183 Mtr-Chr4 35388134 35388940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2183 82 143 Calmodulin-binding Proteins AT3G43120 56.452 8.28e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2183 K14488 - gmx:100786095 158.303