Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2181 ATGGCCATTATCAAGAAATACTCCAACAAACTACCTCAAAATGCAGTTTTGAAACAAATCCTTAAAAGATGTTCAAGCTTAGGAAAGAATGAACAACCTATGGATGTTCCAAAAGGTCATTTTCCAGTCTACGTAGGTGAAAACCGTAGTAGATATATTGTTCCAATATCTTTTTTAACTCATCCTGAGTTTCAATCACTACTTCGTCAAGCTGAAGAAGAATTTGGTTTTGATCATGATATGGGCCTTACTATTCCTTGTCAAGAAGTTGTTTTTCAATCTCTAACATCAATGATTAGATGA 303 0.3399 MAIIKKYSNKLPQNAVLKQILKRCSSLGKNEQPMDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCQEVVFQSLTSMIR* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2181 100 Pfam Auxin responsive protein 24 99 IPR003676 GO:0009733
Mtr4g2181 100 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 100 - -
Mtr4g2181 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2181 Mtr-Chr4 35369982 35370793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2181 21 100 Calmodulin-binding Proteins AT3G43120 47.059 1.42e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2181 K14488 - oeu:111410569 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2181 4 35369982 35370793 Mtr4g2181 4 35369982 35370793 ECH
Mtr4g2181 4 35369982 35370793 Mtr5g0866 5 8530328 8531223 ECH
Mtr4g2181 4 35369982 35370793 Mtr8g2421 8 34636785 34637536 ECH