Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2180 ATGTCGCCGTCAACCTCCACCGGAAACTGCAGCAAAATCCGCCGCATTGTTCGCCTCCGTCAAATGCTTCTCCGGTGGCGAAAGAAAGCTCGATTAGGAGCGTATGATGTACCGGAAGGACACGTGGCGGTTTGTGTGGGTCCCAGTATGAGAAGATTCGTTGTTCGTGCTAGTTACTTGAATCACCCGATCTTCAAGAAGCTTCTGATACAAGCGGAGGAAGAGTACGGTTTCTGCAACCATGGACCGCTTGCGATTCCGTGTGATGAGTTTGAGTTTGAAGAGATTCTTCGGGTTATGGCCCGACCCGAGTTCAGGTTCTCGACGGTTGAAGATTTTCAGAGACGATGCCACGTGGATGTTAGAAGTAGTAATAGTTGTGAATCGAGGCCTTTGCTTCGTGACGACTCCATTTGTTGA 420 0.4976 MSPSTSTGNCSKIRRIVRLRQMLLRWRKKARLGAYDVPEGHVAVCVGPSMRRFVVRASYLNHPIFKKLLIQAEEEYGFCNHGPLAIPCDEFEFEEILRVMARPEFRFSTVEDFQRRCHVDVRSSNSCESRPLLRDDSIC* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2180 139 PANTHER SMALL AUXIN-UP RNA-RELATED 8 135 - -
Mtr4g2180 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 135 IPR003676 GO:0009733
Mtr4g2180 139 Pfam Auxin responsive protein 19 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2180 Mtr-Chr4 35355803 35356659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2180 8 139 Calmodulin-binding Proteins AT4G34750 50.667 4.61e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2180 K14488 - gmx:100795345 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2180 4 35355803 35356659 Mtr4g2180 4 35355803 35356659 ECH