Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2177 ATGGCCGCAACTCAAACTCTCTCTTCTTCCTTAGCGAAACCCTCCCTTCTCCCTCCCAACAACAATCGCTTCTTCTCCACATCCCTCCATAAACCTACTCTCCCCTCTCTCTCCGACACCCGAAAACCCCTTTTCCTCACTTCCTCCTCCAAAAACCCAATTTCCGACATCATCCTCTCCAACAAAAACCACCCACAAGACGAGGTTGTTTTCATCAACGACGACAAGCCTCGTGAAGAGTGCGGCGTTGTTGGTATCTACGGCGACTCAGAAGCCTCCCGTCTCTGCTACTTAGCCCTCCACGCTCTCCAACACCGCGGCCAAGAAGGCGCTGGAATCGTCACCGTTAACAACAACGTTCTTCAATCCATCACCGGTGTTGGTCTTGTCTCCGATGTCTTCAACGAAACCAAACTCGATCAGTTACCCGGAAGCTTAGCCATCGGCCATGTTCGTTATTCTACTGCTGGACAGTCCATGTTGAAGAATGTTCAACCTTTTGTTGCTGGGTACCGTTTTGGTTCTGTTGGTGTTGCTCATAACGGTAATTTAGTTAATTATCGTACTTTAAGAGCTAAGCTTGAAGAAAAAGGTTCGATTTTTAACACTACTTCTGATACTGAAGTTGTTCTTCATTTGATTGCTACTTCAAAGCATAGACCTTTTATTTTAAGAATTGTTGATGCATGTGAGAAGCTTGAAGGTGCTTATTCGATTGTGTTTGTTACTGAGGATAAGCTTGTTGCTGTGAGGGATCCATTTGGGTTTAGGCCTTTGGTTATGGGGAGGAGAAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGGGAAGTTTTCCCTGGTGAGGTTATTGTGGTTGATAATAATGGGATTCAATCGCTTTGTTTGATGGCACATCCGCAGCCGAAGCAGTGTATCTTCGAGCATATTTACTTTGCTTTGCCTAATTCTGTTGTTTTTGGTAGGTCTGTGTATGAATCGCGTAGGCGATTTGGTGAGGTGCTTGCTACTGAGAGTCCTGTTGATTGTGATGTTGTGATAGCTGTTCCTGATTCTGGTGTTGTGGCTGCTCTTGGTTATGCTGCGAAAGCTGGTGTTCCTTTTCAGCAAGGGTTGATTAGGTCACACTATGTAGGAAGGACTTTCATTGAGCCATCTCAGAAAATTAGGGATTTTGGTGTGAAGTTGAAGCTTTCGCCTGTTCGTGCTGTGCTTGAAGGTAAAAGGGTTGTTGTCGTTGATGACTCAATTGTGAGGGGAACAACATCGTCCAAGATTGTGAGGTTGCTTAAGGAAGCAGGTGCAAAAGAAGTTCACATGAGAATTGCAAGTCCACCAATTATTGGTTCTTGTTACTATGGTGTGGATACACCTAGCTCAGAGGAGCTGATATCTAATAGGATGAGTGTTGAAGAAATAAGGGATTTTATTGGATCTGATTCACTTGCTTTTCTTCCAATTAATAGCTTGCATAGTATGTTGGGTAATGATTCTCCTAATTTTTGTTATGCTTGTTTCTCTGGGAAATACCCTGTTGAGCCTAGAGAGCTTAAGGTTAAAAGGGTTGGTGACTTTGTTGATGATGGTTTGAATGGGAGTTTGGAACAAATTGATGGTGGTTGGGTTCAAGCCAACAGAAATCCACCAAAAGAGGTGAATACTGCTACTGGTCTTTGA 1710 0.4363 MAATQTLSSSLAKPSLLPPNNNRFFSTSLHKPTLPSLSDTRKPLFLTSSSKNPISDIILSNKNHPQDEVVFINDDKPREECGVVGIYGDSEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNETKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEEKGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVIVVDNNGIQSLCLMAHPQPKQCIFEHIYFALPNSVVFGRSVYESRRRFGEVLATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPINSLHSMLGNDSPNFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLEQIDGGWVQANRNPPKEVNTATGL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2177 569 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 81 304 IPR029055 -
Mtr4g2177 569 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 29 553 - -
Mtr4g2177 569 Hamap Amidophosphoribosyltransferase [purF]. 80 521 IPR005854 GO:0004044|GO:0009113
Mtr4g2177 569 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 81 300 IPR017932 -
Mtr4g2177 569 CDD GPATase_N 81 331 IPR035584 -
Mtr4g2177 569 Pfam Phosphoribosyl transferase domain 355 450 IPR000836 -
Mtr4g2177 569 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 81 522 IPR029055 -
Mtr4g2177 569 Gene3D - 340 504 IPR029057 -
Mtr4g2177 569 SUPERFAMILY PRTase-like 316 527 IPR029057 -
Mtr4g2177 569 CDD PRTases_typeI 343 454 IPR000836 -
Mtr4g2177 569 Pfam Glutamine amidotransferase domain 159 278 IPR017932 -
Mtr4g2177 569 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 29 553 - -
Mtr4g2177 569 TIGRFAM purF: amidophosphoribosyltransferase 81 522 IPR005854 GO:0004044|GO:0009113
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2177 52 554 PRT Gene Family AT4G34740 82.143 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2177 K00764 - gmx:100791919 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2177 4 35332648 35334883 Mtr4g2177 4 35332648 35334883 ECH