Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2164 ATGGAAGTTGTTGTAGCGGAAGCGTTGAAACCAAGTTTGAGGACAGAATCTATTTTCCAACAAACAATTTGCGAAGAGATTTTGTGTTTGAATGCAAACAACGTTGTTGTCGGAGAAGATTTTTCTGTCGACGACTTGCTTGATTTTTCCAACGGTGAATTTCAGCATGGTTCTGTCGGAAAAGAAGTTGATGTTTGCGAGGAAGAAGAAGAGGAAGAACATGAGAAAAACAGCACCACCTCCGGTTCTGAACATGAACGAACCGAAGATGACGACAATTCAAATTCCACAACATTTTCCGGCGCCGGAGACGGCGAGTCTAACTCCATTTTTGCCGGTGGTTTAGCAGTTCCGGCAGATGATGTTGCGGATTTGGAATGGGTGTCTCACTTTGTGGACGATTCTATACCAGAACTGTCTCTATTGTATCCAGTTCAGGCCCGGTCCGAACCGGAACCTAGACCGGGCCCAACCAATGCTTATTCCCAACTCTCTATAATCCGCAGAAAGCCTAGAACAACCAAGACAAGAAGGCCCAACTGTAACGTGTGGATTTTCAACCCTATACTCTATTCAGCAAAGAAGCAGAGGAAAAAGCCCGAAGCCCAAACGGGTGGGGCTCATTTTCAACGACGGTGCAGCCACTGCCATGTTCAGAAAACGCCACAGTGGAGAGCCGGTCCGCTTGGACCGAAAACACTATGTAACGCTTGTGGTGTTCGGTTTAAGTCCGGTCGGCTTTTCCCGGAGTATAGACCGGCATGCAGCCCGACGTTTTCCGGTGAAATTCATTCGAACAGCCACCGTAAGGTTTTGGAAATGAGGCGGAGGAAGGAGGTGGATGAACCGGTTTCTGGTCTGAACCGGATTCAAATGGTCACGAGTTGGTGA 891 0.4792 MEVVVAEALKPSLRTESIFQQTICEEILCLNANNVVVGEDFSVDDLLDFSNGEFQHGSVGKEVDVCEEEEEEEHEKNSTTSGSEHERTEDDDNSNSTTFSGAGDGESNSIFAGGLAVPADDVADLEWVSHFVDDSIPELSLLYPVQARSEPEPRPGPTNAYSQLSIIRRKPRTTKTRRPNCNVWIFNPILYSAKKQRKKPEAQTGGAHFQRRCSHCHVQKTPQWRAGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSGEIHSNSHRKVLEMRRRKEVDEPVSGLNRIQMVTSW* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2164 296 MobiDBLite consensus disorder prediction 75 93 - -
Mtr4g2164 296 Gene3D - 208 282 IPR013088 GO:0006355|GO:0008270
Mtr4g2164 296 MobiDBLite consensus disorder prediction 147 175 - -
Mtr4g2164 296 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 209 270 - -
Mtr4g2164 296 ProSitePatterns GATA-type zinc finger domain. 213 238 IPR000679 GO:0006355|GO:0043565
Mtr4g2164 296 Pfam GATA zinc finger 213 246 IPR000679 GO:0006355|GO:0043565
Mtr4g2164 296 SMART GATA_3 207 261 IPR000679 GO:0006355|GO:0043565
Mtr4g2164 296 ProSiteProfiles GATA-type zinc finger domain profile. 211 243 IPR000679 GO:0006355|GO:0043565
Mtr4g2164 296 CDD ZnF_GATA 212 269 IPR000679 GO:0006355|GO:0043565
Mtr4g2164 296 MobiDBLite consensus disorder prediction 60 105 - -
Mtr4g2164 296 PANTHER GATA TRANSCRIPTION FACTOR 192 296 - -
Mtr4g2164 296 PANTHER GATA TRANSCRIPTION FACTOR 1 190 - -
Mtr4g2164 296 PANTHER GATA TRANSCRIPTION FACTOR 192 296 - -
Mtr4g2164 296 PANTHER GATA TRANSCRIPTION FACTOR 1 190 - -
Mtr4g2164 296 PIRSF Txn_fac_GATA_plant 24 295 IPR016679 GO:0003677|GO:0005634|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2164 Mtr-Chr4 35195912 35197647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2164 40 281 C2C2-Gata Transcription Factor Family AT4G36240 44.922 8.14e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mtr4g2164 GATA 6.2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2164 - - gmx:100776188 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2164 4 35195912 35197647 Mtr4g2164 4 35195912 35197647 ECH