Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2141 ATGGGAGAGGTTGCGCGTGGAGGTGGTTGTTGTCCTCCGATGGATCTATTCCGTTCCGAACCTATGCAACTCATTCAGCTCATCATTCCCATGGAATCCGCTCACTGCACCGTTTCATATCTCGGTGACCTTGGCCTCCTTCAGTTCAAAGATCTTAATTCAGAGAAGAGCCCTTTTCAACGTACTTATGCAGCTCAGATTAAAAGATGTGGAGAGATGGCTCGTAAATTGCGTTTTTTCAAGGAGCAAATGTTTAAGGCAGGTGTTTCACCAAAAGGTTCCACAACACAGTCTGACGTGAACATCGATGACATTGAGATAAAACTTACAGAAATCGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCACATACAATGAACTTGTTGAGTATAAGCTTGTTCTGCAGAAGGCTGGTGACTTTTTCCACTCAGCTCAAAGCCGTGCCATTGAGCAGCAAAGAGAATATGAATCACGCCAACTGAGTGGGGAATCTATGGAAGCACCTTTATTACAGGACCAAGAATTATCAGGTGATTCATCAAAGCCAGTTAAGTTGGGGTTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCCATGGCATTTGAGAGAATCTTATTTCGTGCTACTAGAGGCAATGTATTTTTGAGGCAGACTGCTGTTGAGGATCCGGTCACAGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTCGTCTTTTATGCCGGTGAAAAAGTGAAAGCCAAGATTCTGAAAATATGTGACGCCTTTGGTGCTAATCGATACCCGTTTGCTGAGGAACTTGGAAAACAAGCTCAAATGATTTCGGAGGTTTCTGGAAAGCTTGCAGAATTGAAGACCACCATAGACGCTGGACTTTCGCACCGAGTTAACTTGCTGGAAAATATTGGGACTCAATTCGAGCAATGGAATCTTTTGGTGAGGAAGGAAAAATCCATTCACCATACCCTTAACATGCTAAGCCTGGATGTAACGAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTGTTTTTGCAACACACCAGGTCCAGGATGCATTAAAGCGGGCTGCAAAGGACTCTAACTCTCAGGTCAGTGCCATTTTGCAAGTTTTGCATACCAGGGAGTCACCACCTACCTACTTTCGCACAAACAAATTTACATCTTCGTATCAAGGAATTATAGACTCATATGGGGTTGCTAAGTATCAAGAGGCAAATCCTACTGTGTTCACTGTAGTTACCTTTCCATTTCTTTTCGCCGTTATGTTTGGTGATTGGGGGCATGGAATATGTTTACTGCTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACGGCAATGACTTTTGGAGGTCGTTATGTTATTTTCTTGATGTCACTCTTCTCAATCTACACTGGCCTGATCTATAATGAGTTCTTTTCTGTCCCATTCGAACTCTTCGGTCCCTCTGCATATGTGTGTCGCGACGATTCTTGCAGGGATTCTACAACAATAGGGCTGATTAAAGCGGGTCCTACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACACGTAGTGAATTACCATTCCTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGTGTTGCTCAAATGAACCTTGGAATTATAATGAGCTATTGCAATGCCAAGTTCTTCAAAAACAACGTTAATGTATGGTTCCAATTTATCCCCCAAGTGATATTTCTCAATAGTCTATTCGGGTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACGGGTTCTCAAGCCGATTTGTACCATGTAATGATCTACATGTTTCTGAGCCCAACCGATGATTTGGGCGAGAACCAACTCTTTGCTGGTCAGAAAAATGTTCAGCTTGTGCTTTTGCTTCTGGCTGGTGTTGCTGTGCCCTGGATGCTGTTGCCAAAACCCTTTATTTTGAAGAAGCAACATGAAGCTAGGCACGGGGATGAATCCTACGCACCACTTCCAAACACAGAGGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCATGGTCATGGGGAATTTGAGTTCAGTGAAATTTTTGTACATCAACTTATACACACTATAGAATTTGTACTTGGAGCAGTATCTAATACAGCTTCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGCTTATGGCATGGGGGTACAATAATGTGGTTATCCTGATAGTGGGTCTCATTGTTTTCATTTTCGCTACTGTTGGAGTGTTACTTGTCATGGAAACTCTGAGTGCCTTCTTGCATGCATTGCGTCTTCACTGGGTGGAGTACCAAAACAAATTTTACGAGGGCGATGGCTACTTGTTTCTCCCTTTCTCGTTCTCATTGCTGGACGAAGAGGATGAGATGCTTTGA 2469 0.4297 MGEVARGGGCCPPMDLFRSEPMQLIQLIIPMESAHCTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQIKRCGEMARKLRFFKEQMFKAGVSPKGSTTQSDVNIDDIEIKLTEIESELTEMNANGEKLQRTYNELVEYKLVLQKAGDFFHSAQSRAIEQQREYESRQLSGESMEAPLLQDQELSGDSSKPVKLGFLAGLVPREKSMAFERILFRATRGNVFLRQTAVEDPVTDPVSGEKTEKNVFVVFYAGEKVKAKILKICDAFGANRYPFAEELGKQAQMISEVSGKLAELKTTIDAGLSHRVNLLENIGTQFEQWNLLVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATHQVQDALKRAAKDSNSQVSAILQVLHTRESPPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVFTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITAMTFGGRYVIFLMSLFSIYTGLIYNEFFSVPFELFGPSAYVCRDDSCRDSTTIGLIKAGPTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNAKFFKNNVNVWFQFIPQVIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFAGQKNVQLVLLLLAGVAVPWMLLPKPFILKKQHEARHGDESYAPLPNTEESLQVESNHDSHGHGEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNVVILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGYLFLPFSFSLLDEEDEML* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2141 822 Coils Coil 815 822 - -
Mtr4g2141 822 PIRSF ATP6V0A1 12 821 IPR026028 GO:0000220|GO:0046961
Mtr4g2141 822 PANTHER VACUOLAR PROTON ATPASES 7 820 IPR002490 GO:0033179|GO:0046961|GO:1902600
Mtr4g2141 822 Coils Coil 102 129 - -
Mtr4g2141 822 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 7 820 - -
Mtr4g2141 822 Pfam V-type ATPase 116kDa subunit family 40 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2141 Mtr-Chr4 34900480 34911059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2141 14 820 Primary Pumps ATPases(2) AT2G21410 77.970 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2141 K02154 - gmx:100810062 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2141 4 34900480 34911059 Mtr4g2141 4 34900480 34911059 ECH