Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2138 ATGGTTGAAAGAAGGGTTTGCAGTGAGCTTGGTATCCAAGCTGATCGTGTTAAATCTGACAAGGGCAGAGGAACTGATGGGGTGAAAAAAATGAAAAAGTCGAATTCAATTAAGCTTTCGGATTTGGAGGCTCTTCAATCACAACCTCCAAGGAGGAGTGTATCTCGATCAAGAAAGTTGTTACCACTTCATGTTCCAACCACTGAGTCTTTGCAGAGAAGGTCACCAAATTACATGAAGCATATCAGCAGTTCAGATGCAAAAAAGGAGCTAGTACCGGTGAGTCTTCAGAATAACCAATTTGGTTCAGATGCTAAGAATCTACCACAGAAGTGTTTGAGTAATTCAAAATCCAGTTCTCTGTCTAGCAGAAAAACTGCAAAAACTATGTCAAGATCATCTAGTGTGAATTTGGTTAGAATATTAACGAAGGCTTCTAATTTAAAGCCAAGTACAACTTGTATGCAAAAATCTACCACAGCAGCGCTGCGTGCAGATATTAATGCACCATGCAGAGCTACTTGCTCTTCAAATTTAAAAGATGCCAAGTTCCCTGCACACCTCTTGCTTAATCCTGGAACTTCGATCATGAAGATTTGTCCATCTACATATTGTTCTCTCAATGGCAATCAACATGCTCCTTTGCCTCAATTTAATTGCATCATGTCAGCAAAGAATGACCTTTTGAAGACTCGGAAGAGTATAAAGATGGAAGTGCCTCGAAGACTGAAGGTGCCTTGTGAGATAAGGAAGGATTTTGATATTGAGCAGATTGTCTTTGATGAAGTTGATGCCATGGAAAGGGAAAAGGCATACGAAATGGGAAGATCGGACACTGTCAAACACCTTGAGGATCCAGAAGGTGTCAAGTTTGCAATGGAGGGGAATGGCAACATAGCAGATGAGAAATGTGTCTATCATGTAACTCCATGTTTGCCTTGTGGTGATCTCACCAAGTCTGAGATGAATCCCAAGGTGGAATTCAAAAACTACTTTGACATTTCTGAAATTGAAGCAGATACCGAGGAAAGCATTCACCAAGAACCAAAGGCTATAGATACGGACAAAAACCACCAACCTAACTGGTTTCATGAAGAAATATGTACAGGAAGCTACTGTGGTGATGTAAGCTCTGATGGGGAACAAATGGAGAATAATGAATTGGGCGATTCTGATTCCCAAGGTTTTGAGGAACAGTTTTGTCCAGTCAACCATAAAAAGGATATTGGTTCTTCTGTCATCACATGGGAGACAGACTCAAAATACAAGTCCTTATCAGAGGGTCCTCATCGCAATATATTTGAAACGTCGCTAGATGACATTCTTAGCAACCATTATGTGGACATTATGGTTGAAAAATCACTGCAAGGTAACAAGGAAAAAAATACATCTTTTGATGCACAACCTCGGGTCCAGGAAAGCACAAATAGAAGCATACAAACTGACTACCTGTCCAACGACACAGATCATGAGTATGACCAATCTTATTTGGAAGAGGAAAAATTTCAGTGTTTGACAAACACAGAAGATAATGATAGAGAAAATGAAAAACATGTGGAAAATGAGGCTGGTTGTGCCTCAATGATACTTAATGGAGATACAATTGACAATAGTGATGGTCACGGGATCTGTGAAACCTGCAAGATTGAAGAGAGCCGTGAAGATAGCAACACAAACCTAGAGAATAAGGACACAGAAATTCACCAAAGGAACCAAATTCCCTCAACTGATGTGCCTGAAGAGATCACCATTATTTTTCCGGACCAGCTATTACTGGAGGAAGATCAATTTGCTGCTACTATGTTCCAGACTAAAAGCTGCATAGGTGGTGAAGAGCGAAACACAAGCAATAAGTGGCAATGGCCAACTATGAACAAGAGACCTATGCAAGATGTTGAGGAAATGAGAAAGATCAACCCAAGAAAGCCAAATTTCCTGCCCTTGGTTTCTGATCGAGAACCAGAGAAGGTTGAACTGAAGCATCAGATGATGGATGATAGAAAAAATGCAGAGGAATGGATGCTTGATTTTTCACTCAGAAAAGCTGTCACTAAACTTGCTCCAGCCAGGAAAAAGAAGGTTGCATTGCTTGTTGAAGCTTTTGAAACAGTAATGTCAACATCAAAATGTGAAACTCATAGGAGAAACAATTTGTGCTTCGCTCATGCAAGAACTGTTCAAGCTTGTATCTGA 2193 0.4026 MVERRVCSELGIQADRVKSDKGRGTDGVKKMKKSNSIKLSDLEALQSQPPRRSVSRSRKLLPLHVPTTESLQRRSPNYMKHISSSDAKKELVPVSLQNNQFGSDAKNLPQKCLSNSKSSSLSSRKTAKTMSRSSSVNLVRILTKASNLKPSTTCMQKSTTAALRADINAPCRATCSSNLKDAKFPAHLLLNPGTSIMKICPSTYCSLNGNQHAPLPQFNCIMSAKNDLLKTRKSIKMEVPRRLKVPCEIRKDFDIEQIVFDEVDAMEREKAYEMGRSDTVKHLEDPEGVKFAMEGNGNIADEKCVYHVTPCLPCGDLTKSEMNPKVEFKNYFDISEIEADTEESIHQEPKAIDTDKNHQPNWFHEEICTGSYCGDVSSDGEQMENNELGDSDSQGFEEQFCPVNHKKDIGSSVITWETDSKYKSLSEGPHRNIFETSLDDILSNHYVDIMVEKSLQGNKEKNTSFDAQPRVQESTNRSIQTDYLSNDTDHEYDQSYLEEEKFQCLTNTEDNDRENEKHVENEAGCASMILNGDTIDNSDGHGICETCKIEESREDSNTNLENKDTEIHQRNQIPSTDVPEEITIIFPDQLLLEEDQFAATMFQTKSCIGGEERNTSNKWQWPTMNKRPMQDVEEMRKINPRKPNFLPLVSDREPEKVELKHQMMDDRKNAEEWMLDFSLRKAVTKLAPARKKKVALLVEAFETVMSTSKCETHRRNNLCFAHARTVQACI* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2138 730 Coils Coil 730 730 - -
Mtr4g2138 730 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 259 730 IPR044681 GO:0005516
Mtr4g2138 730 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 260 IPR044681 GO:0005516
Mtr4g2138 730 MobiDBLite consensus disorder prediction 105 134 - -
Mtr4g2138 730 SMART CaM_binding_2 593 706 IPR012417 GO:0005516
Mtr4g2138 730 MobiDBLite consensus disorder prediction 17 37 - -
Mtr4g2138 730 MobiDBLite consensus disorder prediction 17 75 - -
Mtr4g2138 730 MobiDBLite consensus disorder prediction 39 54 - -
Mtr4g2138 730 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 259 730 - -
Mtr4g2138 730 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 260 - -
Mtr4g2138 730 Pfam Plant calmodulin-binding domain 625 706 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2138 Mtr-Chr4 34886574 34889580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2138 590 729 Calmodulin-binding Proteins AT2G38800 42.857 2.61e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2138 - - mtr:MTR_4g071030 1462.2