Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2134 ATGAAAAACATCACATGTTATTTGCTACTATTGTGCATGTTATTTACAACGTGTTATTCATTAAATAATGATCTTGATGCGTTGCTAAAGCTAAAAAAATCAATGAAAGGAGAGAAAGCCAAAGATGATGCACTCAAAGACTGGAAATTTTCAACTTCTGCTTCAGCTCACTGTTCATTTTCCGGTGTAAAATGCGACGAAGATCAACGTGTGATTGCTTTGAACGTGACGCAAGTTCCACTCTTCGGACACCTTTCCAAGGAGATCGGAGAGTTGAACATGCTCGAGAGCCTTACAATCACTATGGACAATCTCACCGGCGAGCTTCCAACTGAGCTATCCAAACTTACTTCTCTTAGAATCCTCAACATCTCTCACAACCTCTTCTCCGGTAACTTCCCCGGCAACATCACTTTTGGAATGAAGAAACTTGAGGCTCTAGATGCTTATGACAATAATTTCGAAGGTCCTCTTCCAGAGGAAATCGTTAGCCTGATGAAACTCAAGTACTTAAGTTTTGCTGGAAACTTTTTCTCCGGTACAATACCGGAGAGTTACTCGGAGTTTCAGAAGTTGGAGATTTTAAGGCTGAACTATAACAGTTTAACAGGGAAGATTCCTAAGAGTTTGTCGAAGTTAAAGATGCTAAAGGAACTCCAATTAGGTTATGAGAATGCTTACTCCGGTGGAATTCCACCGGAGTTAGGTTCAATCAAATCTCTCCGATATCTTGAAATTTCTAACGCTAACCTCACCGGAGAAATTCCACCGAGTCTTGGAAATTTAGAAAACCTCGACTCCTTGTTTTTGCAAATGAACAACCTCACCGGAACAATTCCACCCGAACTCTCTTCAATGCGGAGTCTCATGTCGTTGGATCTCTCCATCAACGGACTCTCAGGGGAGATTCCAGAAACCTTCTCAAAGCTGAAAAATCTCACTCTCATCAATTTCTTCCAGAACAAGCTTCGCGGTTCAATTCCAGCGTTCATCGGCGATCTTCCTAACCTCGAAACGCTTCAGGTTTGGGAAAACAATTTCTCTTTTGTATTGCCGCAGAATCTCGGTTCAAACGGAAAGTTCATATACTTTGACGTTACGAAGAATCACCTCACCGGATTGATCCCACCGGAGTTATGCAAATCAAAGAAGTTGAAAACGTTTATCGTTACTGACAACTTCTTCCGCGGTCCAATACCTAACGGAATTGGCCCGTGTAAGTCACTTGAAAAAATCAGAGTGGCTAATAACTACTTGGACGGCCCGGTCCCACCGGGGATTTTTCAGTTGCCTTCTGTACAGATAATAGAGCTTGGAAATAACCGTTTTAACGGCCAACTACCAACGGAGATTTCTGGCAATTCTCTCGGGAATCTCGCTCTTTCTAACAATTTATTTACCGGGAGGATTCCGGCGTCCATGAAGAATCTCCGATCACTGCAGACGCTGTTACTCGATGCCAATCAGTTTCTCGGAGAAATTCCGGCAGAGGTCTTTGCTTTACCGGTGTTGACTAGAATCAACATAAGTGGCAATAATCTCACTGGTGGAATTCCAAAGACGGTTACTCAATGTAGTTCACTGACTGCAGTTGACTTCAGCCGAAACATGCTTACCGGTGAGGTTCCTAAAGGGATGAAGAATCTGAAGGTTCTAAGCATTTTTAATGTTTCGCATAATAGCATATCTGGGAAAATCCCTGATGAGATTAGATTCATGACGAGTCTAACGACGCTGGATTTATCTTACAACAATTTTACCGGAATTGTCCCCACAGGTGGTCAGTTTTTGGTCTTCAACGACCGGTCATTTGCCGGAAATCCTAGCCTATGTTTCCCCCACCAAACAACATGTTCTTCATTGCTCTATCGTTCGAGAAAAAGCCATGCAAAGGAGAAAGCTGTCGTCATAGCAATCGTCTTCGCCACAGCGGTGTTAATGGTAATTGTAACACTGCACATGATGAGGAAGAGGAAGCGTCACATGGCAAAAGCATGGAAGCTAACAGCGTTTCAGAAGTTGGAATTCAGAGCAGAGGAAGTAGTGGAGTGTCTGAAAGAAGAGAACATAATAGGAAAAGGAGGAGCTGGGATTGTCTACAGAGGGTCCATGGCAAACGGAACAGACGTTGCGATAAAGCGTTTAGTTGGACAAGGAAGTGGTAGAAATGATTATGGATTCAAAGCTGAGATAGAGACATTGGGAAGGATTAGACACAGAAACATAATGAGGCTTTTGGGATATGTTTCAAACAAGGATACAAATTTGTTGTTGTATGAGTACATGCCTAATGGTAGTTTAGGTGAGTGGCTTCATGGTGCAAAAGGTTGTCATTTGAGTTGGGAAATGAGGTACAAAATTGCTGTGGAAGCTGCTAAGGGACTTTGCTATTTGCACCATGATTGTTCACCTCTTATCATTCATAGGGATGTTAAGTCTAATAATATATTGCTTGATGCTGATTTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGTATGATCCAGGTGCTTCTCAATCCATGTCCTCAATTGCTGGCTCCTACGGCTACATTGCTCCAGAATATGCATACACTCTCAAAGTGGATGAAAAAAGTGATGTGTATAGTTTCGGAGTGGTGCTATTGGAGCTGATAATAGGAAGGAAGCCAGTTGGTGAATTTGGAGATGGAGTAGACATCGTTGGATGGATCAATAAAACTGAATTAGAACTTTATCAGCCATCAGATAAAGCATTAGTGTCAGCAGTGGTGGACCCACGACTCAATGGATACCCTTTGACTAGTGTTATCTACATGTTCAACATAGCTATGATGTGTGTTAAAGAAATGGGACCTGCAAGGCCTACCATGAGGGAAGTTGTTCATATGCTCACTAATCCACCTCACTCTACAAGTCACAACTTGATTAATCTCTAG 2925 0.4229 MKNITCYLLLLCMLFTTCYSLNNDLDALLKLKKSMKGEKAKDDALKDWKFSTSASAHCSFSGVKCDEDQRVIALNVTQVPLFGHLSKEIGELNMLESLTITMDNLTGELPTELSKLTSLRILNISHNLFSGNFPGNITFGMKKLEALDAYDNNFEGPLPEEIVSLMKLKYLSFAGNFFSGTIPESYSEFQKLEILRLNYNSLTGKIPKSLSKLKMLKELQLGYENAYSGGIPPELGSIKSLRYLEISNANLTGEIPPSLGNLENLDSLFLQMNNLTGTIPPELSSMRSLMSLDLSINGLSGEIPETFSKLKNLTLINFFQNKLRGSIPAFIGDLPNLETLQVWENNFSFVLPQNLGSNGKFIYFDVTKNHLTGLIPPELCKSKKLKTFIVTDNFFRGPIPNGIGPCKSLEKIRVANNYLDGPVPPGIFQLPSVQIIELGNNRFNGQLPTEISGNSLGNLALSNNLFTGRIPASMKNLRSLQTLLLDANQFLGEIPAEVFALPVLTRINISGNNLTGGIPKTVTQCSSLTAVDFSRNMLTGEVPKGMKNLKVLSIFNVSHNSISGKIPDEIRFMTSLTTLDLSYNNFTGIVPTGGQFLVFNDRSFAGNPSLCFPHQTTCSSLLYRSRKSHAKEKAVVIAIVFATAVLMVIVTLHMMRKRKRHMAKAWKLTAFQKLEFRAEEVVECLKEENIIGKGGAGIVYRGSMANGTDVAIKRLVGQGSGRNDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGCHLSWEMRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWINKTELELYQPSDKALVSAVVDPRLNGYPLTSVIYMFNIAMMCVKEMGPARPTMREVVHMLTNPPHSTSHNLINL* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2134 974 Pfam Leucine Rich Repeat 191 213 IPR001611 GO:0005515
Mtr4g2134 974 Pfam Protein tyrosine and serine/threonine kinase 686 960 IPR001245 GO:0004672|GO:0006468
Mtr4g2134 974 Pfam Leucine Rich repeat 574 588 IPR001611 GO:0005515
Mtr4g2134 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Mtr4g2134 974 SMART LRR_typ_2 430 454 IPR003591 -
Mtr4g2134 974 SMART LRR_typ_2 262 286 IPR003591 -
Mtr4g2134 974 SMART LRR_typ_2 189 213 IPR003591 -
Mtr4g2134 974 SMART LRR_typ_2 477 501 IPR003591 -
Mtr4g2134 974 SMART LRR_typ_2 334 358 IPR003591 -
Mtr4g2134 974 SMART LRR_typ_2 573 596 IPR003591 -
Mtr4g2134 974 SMART LRR_typ_2 116 140 IPR003591 -
Mtr4g2134 974 SUPERFAMILY Protein kinase-like (PK-like) 679 960 IPR011009 -
Mtr4g2134 974 Gene3D Ribonuclease Inhibitor 23 138 IPR032675 -
Mtr4g2134 974 Pfam Leucine rich repeat N-terminal domain 22 66 IPR013210 -
Mtr4g2134 974 SMART serkin_6 685 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2134 974 SUPERFAMILY RNI-like 251 593 - -
Mtr4g2134 974 ProSiteProfiles Protein kinase domain profile. 685 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2134 974 Gene3D Ribonuclease Inhibitor 139 224 IPR032675 -
Mtr4g2134 974 Gene3D Ribonuclease Inhibitor 225 330 IPR032675 -
Mtr4g2134 974 Gene3D Transferase(Phosphotransferase) domain 1 762 971 - -
Mtr4g2134 974 PANTHER UNNAMED PRODUCT 8 967 - -
Mtr4g2134 974 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
Mtr4g2134 974 SUPERFAMILY L domain-like 46 255 - -
Mtr4g2134 974 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 8 967 - -
Mtr4g2134 974 Gene3D Ribonuclease Inhibitor 344 621 IPR032675 -
Mtr4g2134 974 Pfam Leucine rich repeat 478 538 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2134 Mtr-Chr4 34866722 34870576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2134 18 972 Receptor kinase-like Gene Family AT1G75820 62.019 0.0 1211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr4g2134 PK_Tyr_Ser-Thr 2.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2134 K00924 - gmx:732625 1454.88