Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2130 ATGGCTTCATCAAGTGGAACATCTTCAGGTTCATCTCTACTACAAAACTCAGGTTCAGAAGAAGATTTACAGGCTTTGATGGATCAAAGAAAGAGGAAGAGGATGATATCGAATCGCGAATCGGCAAGGCGGTCTAGGATGAGGAAACAGAAGCACTTGGATGATCTTGTGTCACAAGTTTCTAAGCTAAGGAAAGAGAATCAAGAAATACTCACAAGTGTTAACATCACCACTCAAAAGTATTTGAGTGTTGAAGCTGAAAATTCAGTGTTGAGGGCTCAGATGGGTGAATTGAGCAACAGGTTGGAATCTTTGAATGAAATTGTTGGTGCCTTGAATTCAAGCAATGGAGTTTTTGGAGCATCAAATGCTTTTGTTGAGCAAAATAATGGTTTCTTCTTCAACTCTTTGAATAATATGTCTTATATGAACCAGCCTATTATGGCTTCTGCAGATATACTGCAGTACTGA 471 0.3885 MASSSGTSSGSSLLQNSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVSKLRKENQEILTSVNITTQKYLSVEAENSVLRAQMGELSNRLESLNEIVGALNSSNGVFGASNAFVEQNNGFFFNSLNNMSYMNQPIMASADILQY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2130 156 PANTHER BZIP TRANSCRIPTION FACTOR 1 154 - -
Mtr4g2130 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Mtr4g2130 156 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Mtr4g2130 156 Coils Coil 88 108 - -
Mtr4g2130 156 MobiDBLite consensus disorder prediction 1 23 - -
Mtr4g2130 156 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Mtr4g2130 156 Pfam bZIP transcription factor 30 74 IPR004827 GO:0003700|GO:0006355
Mtr4g2130 156 Gene3D - 28 83 - -
Mtr4g2130 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 154 - -
Mtr4g2130 156 MobiDBLite consensus disorder prediction 1 51 - -
Mtr4g2130 156 MobiDBLite consensus disorder prediction 24 51 - -
Mtr4g2130 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Mtr4g2130 156 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2130 Mtr-Chr4 34822691 34824183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2130 24 156 bZIP Transcription Factor Family AT4G34590 62.143 1.08e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr4g2130 bZIP_1 1.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2130 K25786 - gmx:100101862 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2130 4 34822691 34824183 Mtr4g2130 4 34822691 34824183 ECH