Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2122 ATGGCACCCAAGAAGGCAGCTCCTCCTCCTTCATCCAAGCCAGCCAAATCTGGCGGTGGCAAACAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTGCTGTTTGATCAGGGTACCTATGACAAGCTCCTAACTGAAGCACCCAAATACAAGCTCATCACTCCTTCTGTCCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAGGGCAATAAGAGACTTGATGGCTAAAGGTTTAATCAGGTTGGTGTCTGCTCATTCAAGTCAGCAGATTTACACCAGGGCTACAAACACCTAG 324 0.4722 MAPKKAAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKYKLITPSVLSDRLRINGSLARRAIRDLMAKGLIRLVSAHSSQQIYTRATNT* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2122 107 MobiDBLite consensus disorder prediction 1 35 - -
Mtr4g2122 107 Pfam S25 ribosomal protein 10 104 IPR004977 -
Mtr4g2122 107 Gene3D - 20 107 - -
Mtr4g2122 107 PANTHER BNAA04G12260D PROTEIN 2 107 - -
Mtr4g2122 107 PANTHER 40S RIBOSOMAL PROTEIN S25 2 107 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2122 Mtr-Chr4 34721479 34724299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2122 1 107 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 88.889 5.48e-53 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2122 K02975 - ming:122063087 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2122 4 34721479 34724299 Mtr4g2122 4 34721479 34724299 ECH