Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2093 ATGTCAGAGTCTACAACCACATCATCAACTTCTCTTATGAGTTTCAAGGTACTTATTTTAGCAGGTATTTTCCTTATCATTGTGATAATCATTGTGCTTTTAATATACCTCTGCTTTCGCGGGAGCAGAAAGAAGAGGAAGATGTTGCCGAAGCTGCATAGCTCCGGCAGCACTCCTCTAGTTTCAAAGGAGATATCAATGGTTAAGGAAATTGATCTCACGCGCTCGTCTGAAAAGCAGACGAGGATTGAGATTATTGAAGATCATGACGAGGTTGGTCCGAAGAAGGAGGCGGAGATTATGGTTGAAATTGGAGGGGTGAGGAAAGGTGACGGTGGGGGCCATATGATGGAGGATCCAAATATAGGGTGGGGTAGGTGGTATAGTCTGAAGGAAGTGGAAATGGCGACACGTGGATTTGAGGAAGGGAATGTTATTGGAGAAGGTGGGTATGGGGTTGTGTATAGAGGTGTTTTGCAAGATGGTTGTGTTGTGGCAGTCAAGAATCTTCACAATAACAAGGGTCAAGCTGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGCAAAGTAAGGCATAAGAATTTAGTTCGATTAGTAGGATATTGTGCAGAAGGTGCTCGAAGGATGCTTGTTTATGAATATGTTGAGAACGGAAATTTGGAGCAATGGCTGCATGGTAATGTAGGGCCAACTAGCCCCTTGACATGGGATATTCGAATGAAGATTGCCATTGGGACTGCAAAAGGGCTAACCTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGAGATATAAAATCAAGTAACATCCTTTTGGACAAAAATTGGAATGCCAAAGTTTCAGATTTTGGCCTTGCCAAGCTCTTAGGATCTGAGAAAACACATGTAACCACGCGTGTAATGGGAACATTTGGATATGTTTCGCCTGAGTACGCAAGCACAGGTATGCTTAATGAGCGTAGCGATGTTTATAGTTTTGGAGTTCTACTCATGGAAATAATCACAGGAAGAAGCCCTATTGATTATTCAAGACCACCTGGAGAGATGAATTTGGTTGATTGGTTTAAGGCAATGGTATCAAGTCGTCGCAGCGACGAGCTAGTCGATCCTTTGATTGAGACTCCACCTTCTCCAAGAGCTCTGAAGCGAGTTTTACTGATTTGCCTACGCTGTATAGACTTGGATGTCATCAAGCGACCGAAGATGGGTCAAATTGTTCATATGCTTGAGTCCGACGATTTCCCCTTTCGTTCTGAGCTACGTACAATTAGGGACAAAGATTATGTACCTTCTCAAGCAGATGTTTCGATCAAAGTTCCATATCAACGAAAGCATACAGAACCTGCAGAAAAATCAACGTGTAGATGA 1374 0.4301 MSESTTTSSTSLMSFKVLILAGIFLIIVIIIVLLIYLCFRGSRKKRKMLPKLHSSGSTPLVSKEISMVKEIDLTRSSEKQTRIEIIEDHDEVGPKKEAEIMVEIGGVRKGDGGGHMMEDPNIGWGRWYSLKEVEMATRGFEEGNVIGEGGYGVVYRGVLQDGCVVAVKNLHNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVENGNLEQWLHGNVGPTSPLTWDIRMKIAIGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKAMVSSRRSDELVDPLIETPPSPRALKRVLLICLRCIDLDVIKRPKMGQIVHMLESDDFPFRSELRTIRDKDYVPSQADVSIKVPYQRKHTEPAEKSTCR* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2093 457 ProSiteProfiles Protein kinase domain profile. 140 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2093 457 PIRSF TyrPK_CSF1-R 2 47 - -
Mtr4g2093 457 PIRSF TyrPK_CSF1-R 134 232 - -
Mtr4g2093 457 PIRSF TyrPK_CSF1-R 231 415 - -
Mtr4g2093 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Mtr4g2093 457 PANTHER RECEPTOR-LIKE KINASE 6 457 - -
Mtr4g2093 457 SMART serkin_6 140 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2093 457 Gene3D Transferase(Phosphotransferase) domain 1 216 423 - -
Mtr4g2093 457 PANTHER OS01G0323000 PROTEIN 6 457 - -
Mtr4g2093 457 Gene3D Phosphorylase Kinase; domain 1 115 215 - -
Mtr4g2093 457 SUPERFAMILY Protein kinase-like (PK-like) 121 412 IPR011009 -
Mtr4g2093 457 Pfam Protein tyrosine and serine/threonine kinase 143 411 IPR001245 GO:0004672|GO:0006468
Mtr4g2093 457 CDD STKc_IRAK 146 412 - -
Mtr4g2093 457 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2093 Mtr-Chr4 34457754 34461560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2093 94 412 Receptor kinase-like Gene Family AT4G02010 47.059 2.00e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mtr4g2093 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2093 - - gmx:100305442 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2093 4 34457754 34461560 Mtr4g2093 4 34457754 34461560 ECH