Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2083 ATGGAATCAAGTTCATCATCAATTAGTCAAGTACCAGCCAATGAAAGATCTGTAAATTGTAGCATTGCTCCTTTAATGACATCCGAGCCTAATAGACCATTCTTCATAGCTGTCTGCACTGATATCATTTGCGAAATAGATCCCCTTTTTGTTGCTGAACACTACGACGAACTAATAGACATCTGGAGCTTGCAAGATGGTTATGGAAATAGTCATCAAGTTCAATTTAACAAATTGATGCTTATGCCAATGCTTACGGAAGGTTGGCACCAATTCAGATTTTTTTATCATATAACTTCAAATCCACTTATGTCTTTCACATATTTGGGTAATAGTACATTCCAAATCAAAATCTTCAATGGTTCTACACCAAAAAATGAATATCCACGATATCATAGACATACTACTTCCTGTCTTAAAGATCTCACATTTGATGTAGACATGCCAGACAAAGATCCAATTAGTTCAAAATTGATTCTACCAACAAACCTTGGAAATTTCCTTCAACTTATAAATCATGAGTACTTAAGACTGTGTGGCACCTCTAACACTATCACTGTTTGCAAACTGATATTCAAAAAAGAAACGATAAATCAAGGACCAACTGTCATAATTGGACGTGGATGGAAAGCCTTCTGCTTGACCAATCGAATTTATCCAGAAAGCCTTCTGAAATTTAAATGTGACTCAATCATGGCCAAAAACATCGTTTCCGTTATGAAAGTATCTAGACGTTATTAA 741 0.3522 MESSSSSISQVPANERSVNCSIAPLMTSEPNRPFFIAVCTDIICEIDPLFVAEHYDELIDIWSLQDGYGNSHQVQFNKLMLMPMLTEGWHQFRFFYHITSNPLMSFTYLGNSTFQIKIFNGSTPKNEYPRYHRHTTSCLKDLTFDVDMPDKDPISSKLILPTNLGNFLQLINHEYLRLCGTSNTITVCKLIFKKETINQGPTVIIGRGWKAFCLTNRIYPESLLKFKCDSIMAKNIVSVMKVSRRY* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2083 246 SUPERFAMILY DNA-binding pseudobarrel domain 29 121 IPR015300 -
Mtr4g2083 246 Gene3D - 26 123 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2083 Mtr-Chr4 34351011 34352076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2083 30 129 B3 DNA Binding Superfamily AT4G01580 26.923 4.47e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2083 - - mtr:MTR_1g090753 240.736