Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2017 ATGCCTAGCATGGCTTCCCCTCTTCTGCTTCCACTTTATTCTACTTGTGGTAAAATTCCTTCTCTTACTGCTTCTCAAAGCATTTCTGTTGAGAAACTTAGAAGATTTGCTCTTAAAGTCAAGTCCACAGAGACAAGGGAATGCACTGCTAATGATATTTTTAATACCAATTCACGTAGAGACTTTCTTGGATTAGCATTAGGAGTCTCTACACTCTTCATCCATTCATTTGATGCTGCCAATGGAGCTGGTTTACCACCAGAAGAAAAACCAAAATTATGTGATGGAACTTGTGAGAAAGAGCTTGAAAATGTACCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGGCAGGGCCCTAGTCCACCAGTTGGATTTCAGGTTGCTGCCAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGCCAGCTTTACATTTTTCGTGTTGGATCTGGTCAGGTGATAAAAGGACTTGATGAAGGTCTTTTGAGCATGAAAGTAGGAGGGAAACGTCGGCTGTACATACCTGGATCGTTGGCATTCCCAAAAGGCCTTAATTCTGCACCAGGAAGACCAAGGGTGGCTCCAAACAGTCCAGTAGTATTTGATGTAAGTTTGGAATATGTACCGGGACTTGACGTGGATGAGGAATAA 690 0.413 MPSMASPLLLPLYSTCGKIPSLTASQSISVEKLRRFALKVKSTETRECTANDIFNTNSRRDFLGLALGVSTLFIHSFDAANGAGLPPEEKPKLCDGTCEKELENVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGSLAFPKGLNSAPGRPRVAPNSPVVFDVSLEYVPGLDVDEE* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2017 229 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 130 222 IPR001179 GO:0003755
Mtr4g2017 229 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 28 229 - -
Mtr4g2017 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC 28 229 - -
Mtr4g2017 229 SUPERFAMILY FKBP-like 97 218 - -
Mtr4g2017 229 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 130 218 IPR001179 GO:0003755
Mtr4g2017 229 Gene3D - 103 219 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2017 Mtr-Chr4 33706514 33709641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2017 111 218 Calmodulin-binding Proteins AT3G25230 36.697 1.16e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2017 K01802 - gmx:100818743 372.474