Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1998 ATGGAGTTTGAGATTGATGACTCTGTTAACGGCGATACAGTAAGGGATGGTGCCATGGTTGAAGCTGGTAGCATACCTGATGAATACATAGAAGAAGAAAGTTCTGCTGAACCAACTTACAAACAAGACCAAGATGATAACGTGGCTCAAGATTCATCTGGAGGAGGGTTAATAATACCTGCTGCAGTTCCCACACTACCGGGCGCATCTGCTGAGGAGCCCTATGTGGGTCAGGAGTTCGAGTCGGAAGCAGCAGCGCATGCATTTTACAATGCATACGCAGCCGAGGTTGGATTCATCATACGCGTAAGCAAGCTCTCACGATCAAGGAAAGACGGAACTGCTATTGGACGGGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCTGACAAGCGTGAAAAGATTGTGAGGCAAAGGGCAGAAACAAGGGTTGGTTGCAGGGCAATGATTATGATGAGGAAAATTAATTCTGGTAAATGGGTTATTACGAAGTTTGTAAAGGAGCACACGCATCCCTTGAATCCTGGAAGTAGTAGAAGGGATATGTTTGAAATTTATCCGTCTCAGAACGAACATGATAAAATCCGCGAACTATCTCAGCAGTTGGCAATAGAGAAAAAGCGATCTGTGACATATAAAAGACAACTTGAAGTGATATTTGATTATATCGAGGAGCATAATGTGGGTCTCTCAAGGAAAATGCAGCGTATAGTAGACAGTGTGAAGGAGATGGAACCTAAAGAAGAAGAAGAACATAATCATTGA 768 0.4349 MEFEIDDSVNGDTVRDGAMVEAGSIPDEYIEEESSAEPTYKQDQDDNVAQDSSGGGLIIPAAVPTLPGASAEEPYVGQEFESEAAAHAFYNAYAAEVGFIIRVSKLSRSRKDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNPGSSRRDMFEIYPSQNEHDKIRELSQQLAIEKKRSVTYKRQLEVIFDYIEEHNVGLSRKMQRIVDSVKEMEPKEEEEHNH* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1998 255 Pfam FAR1 DNA-binding domain 89 176 IPR004330 -
Mtr4g1998 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 251 - -
Mtr4g1998 255 MobiDBLite consensus disorder prediction 1 54 - -
Mtr4g1998 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1998 Mtr-Chr4 33537671 33541160 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr4g1998 FAR1 9.3e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1998 - - var:108338935 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3435 2 48466754 48470849 Mtr4g1998 4 33537671 33541160 PCT