LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g1995	ATGGATCTTTTTGATGATATTCTACTTGAAGTTCCTCCTGCACCTGCTCGGCCTAGTGCCAAGTTTGCGCCCAAGGTCAAATCAAAACAGTCCTTACGAAAGGAAATATCTGCATCAGAACATGCTACCTCGTCTGTAGATGGGAAGAACATGCATGTTGCTTCAACCCCCACGGTCACTAAATCCATTCGTGACACCAACCTCGATAATGATGGTGCAGAGAGTGAATTGAATAAAGTGCCTTCCCCATCCACTGCATTCCTTGACAGCAACAAAAGTTTGCAAGTTAATAACTCATTGCAAGACAGCCTAAATGTTGGCTTCAAAAGTTCTTCAGGCGACAATAGCACTGCAATTTCCGAGAACAACATTCATTCTATTTTTACTTCCGGAAAAGTACAAGAGGATGCTAATGAGAGGAAACAATCTCTAAGGAAGCGTAAAAGATCATATGTTGCTGGTGTGGAGGATGACCGTGATAAAAGCTCAAGGCAGCTGAGAAAACAAGTAGCTTGTGAACATGTTAAAAACTCAAACTCATTGATTGAGGATGATGATGAACTCGACCCTCCTTATATTTGTAACAATATAGATCAAATTGAAGAAAATGATGACGAGGACGAAGTGGATAATTCATCTAAGAAGAAAAGAGCATTAACAAATTCAAAAAAGAAATATATGTCTAAAAATGGAAAAGCTTACAAAAAAAGCAAGAAGGAAAATGGCGATTCAGAAAAAACTACTAAAGAACCACCCAAAAAGTTCTCTCGTTCTTCTCGGCGAAGAAAAAGACAAGTGGACCAGGCTCTGCTGGATGATTATGAACTTGGTTCTCGATCAATTTCTCTTAGGGATATTCTTGCAATTTCAGATGATAAGGAGCGACAGGAGAAAAAGGAGGCAAAATCTTCCACCAATCAAAGTGGTGGGGATTTCTTTCATGATGCCGGTGCTAATAATGAAGAGGAGACTTTTAGTTCAGATGATGATGGTCTTAGAGACCAAGAGGATGATCAAGCTAGTAAAAAGTTTGCGTCAACTGTCCCTTTATACAATTCCCATTCTTTCAGGGACAAGTCACCTAGGGTAAAATGGTCGAAACAAGATACCGAAAAGTTTTATGAGGCTCTGAAGGAGTTTGGCCTAGATTTTACAATGATTCAACAAATTTTTGCTAGTAAAACAAGACGTCAAATTAAGCTGAAGTTCAAGAATGAAGACCAACATCATCCTTTACGAATAACTGATGCTATTAACAGTCATTCATCAGATCATCATATTTTTAAGTCGGTGATTGCGAAACTGCCACAAATTTCTACCACTAATGCAAATCAGGAAGCCACTGAAGACACTACTGAAGACATGTCACCTGGAATTAATGAACAGGTTGCAACAACTGAGCAGGACAGTGCTGATGTTAAAGATCAGGAGGATCCCATGGCGTATCAAAGTCCAGAGCAATTTGATGATAGTGATGATGACTTATGGAAATGGTCTCAGTATCAAAGTGTTATTTAG	1518	0.3913	MDLFDDILLEVPPAPARPSAKFAPKVKSKQSLRKEISASEHATSSVDGKNMHVASTPTVTKSIRDTNLDNDGAESELNKVPSPSTAFLDSNKSLQVNNSLQDSLNVGFKSSSGDNSTAISENNIHSIFTSGKVQEDANERKQSLRKRKRSYVAGVEDDRDKSSRQLRKQVACEHVKNSNSLIEDDDELDPPYICNNIDQIEENDDEDEVDNSSKKKRALTNSKKKYMSKNGKAYKKSKKENGDSEKTTKEPPKKFSRSSRRRKRQVDQALLDDYELGSRSISLRDILAISDDKERQEKKEAKSSTNQSGGDFFHDAGANNEEETFSSDDDGLRDQEDDQASKKFASTVPLYNSHSFRDKSPRVKWSKQDTEKFYEALKEFGLDFTMIQQIFASKTRRQIKLKFKNEDQHHPLRITDAINSHSSDHHIFKSVIAKLPQISTTNANQEATEDTTEDMSPGINEQVATTEQDSADVKDQEDPMAYQSPEQFDDSDDDLWKWSQYQSVI*	506

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	233	254	-	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	37	66	-	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	200	267	-	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	218	232	-	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	13	91	-	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	77	91	-	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	440	467	-	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	134	171	-	-
	Mtr4g1995	505	PANTHER	RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B	17	469	-	-
	Mtr4g1995	505	SMART	sant	361	409	IPR001005	-
	Mtr4g1995	505	PANTHER	TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG	17	469	-	-
	Mtr4g1995	505	SUPERFAMILY	Homeodomain-like	364	409	IPR009057	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	440	493	-	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	293	344	-	-
	Mtr4g1995	505	MobiDBLite	consensus disorder prediction	130	171	-	-
	Mtr4g1995	505	CDD	SANT	364	405	IPR001005	-
	Mtr4g1995	505	Pfam	Myb DNA-binding like	355	434	IPR039467	-
	Mtr4g1995	505	Gene3D	-	293	423	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g1995	Mtr-Chr4	33520659	33525262	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Mtr4g1995		Myb_DNA-bind_7	5.4e-25	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g1995	K15198		-	gmx:100792788	280.026