Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1994 ATGGGGTTCACAGAAAGACATTTTTTAATCTATGGTTTGAATATTCTATTTGAGCTTGTGGTTTTAATATCAAATTTGTGGTGTCAAGTTTATAGTCTTGGTTCCATGTCATCCATTGCAATCTCATATGGTGAAAAAGGCTCAGTTTTTTGTGGTTTGAAATCAGATGGATCTCATACTGTGACATGTTATGGATCCAACTCAGCTATAATCTATGAAACACCAACCCATTTCTCATTTCATGGCCTAACCGCTGGTGATGGATTTGTTTGTGGTCTTCTAATGGATTCAAATCAACCTTATTGTTGGGGTAATAGTAATTACATTGAAATGGGTGTGCCTCAACCTATGATTAAAGAAGCTCGGTACCTAGAAATTAGTGCCGGGGATTACCATGTATGTGGAGTGAGAAAACCTTGGAGTGAAAATGTTTCTTTAGTTGATTGTTGGGGCTATAACATGACCAAAAGTTACGTGTTTGATGGAATGGTTCATTCGATTTCAGCCGGTTCTGAATTTAACTGTGGATTGTTTTCTAACAATAGGAGTGTTTTCTGTTGGGGTGATGAGACTAATAGCAAAGTTATCAGTTTCATTCCATCAAAATTGAAGTTCAAAAAGATTTCTGCTGGTGGTTATCATGTGTGTGGAATCTTAGAAGGGGTAAATTCTAGAACTTTTTGCTGGGGGAGAAGTTTGAACATGGAAGAACAAATTTCAGTAAGACATGTAGGTGGTGAAGGAAATGTTGATTTGCCTCCAAATGATACAATGATATCTGTAGTAGGAGGAAGGTTTCATGCTTGTGGCATAAAAAGCTATGATCATGGAGTTATTTGTTGGGGATTTATGATCAAACCAAGCACTTCAGTTCCTAGTGAGATTAAGGTTTATGAGATTGCAGCTGGTGATTATTTTACTTGTGGAGTAGTTGATGAGAAAAAATCTCTTATGCCTGTTTGTTGGGGTGTCGGGTTTCCTACTTCTCTTCCTTTAGCGGTCTCCCCGGGAATATGCAAGCCTTTTCCATGTCCTTCTGGTTTCTATGAATTTGAACAAAAGGGTCTTTGCAAGTTTCCGAATTCTGGTGTTTGCATGCCGTGCAGTGGTGATTGTCCTGTTGAAATGTATCAGAAAAGTGGATGCAATTTGGCTTCTGATAGAGTGTGTGAATATGACTGTTCATCTTGTTCTTCGCCTGAATGTTTCTTACACTGCTCCTCTTCATATTCCAATGTTGGCAATAAGAAGAAAAATGAGAAAATTTGGGCTTTGCAGTTACCAGTGATTATTGCAGAGATTGGTTTTGTTGTTTTCATTGTTAGTATTGCATCATTAACATCAATTTTATACGTTCGCCGCAGGCTAAGAGATTGTGAGTGTCCTGCAAGATTAGAAAAGGCGAAGAAACTCAGCAGAAGTTCTTCCCTCCAAAATGAGAACAGAAACAACAGGATCCGTCCAGAAATGGAGGAGTTCAAGCTTAGGAAGGCTCAAAGGTTCACCTACGAGGAGCTTCAAACTGCAACATGTGGATTCAAAGAAGAATCCATAGTAGGGAAAGGAAGTTTTTCTTGTGTATTCAAAGGAGTTCTGAAAGATGGAACAGTTGTAGCTGTTAAAAGGGCTATAGTATCTCTATCTTCTTCAAACAACATCCACAAGAATTCCAATGAGTTTCACACTGAACTTGATTTACTCTCAAGATTGAACCATGCTCATTTGCTCAACCTTCTTGGCTACTGCGAAGAAGATGGAGAAAGACTTCTTGTCTATGAGTTCATGGCTAATGGATCTTTGTATGAACACCTACATGGCACAAACCAAGTGTTGAAACAGCATTTAAACTGGATAAGAAGGGTAACAATAGCAGTTCAAGCGGCTCGTGGAATCGAATATTTACACGGCTACGCTTGTCCACCGGTGATTCATAGAGATATTAAATCCTCAAACATACTCATTGATGAAGAACACAATGCAAGAGTAGCTGATTTTGGTTTATCATTGTTAGGTCCTGTTGATAGTAGTTCTCCGCTCGCCGAGCTACCAGCCGGAACTCTCGGTTACCTTGATCCTGAATACTATAGACTTCATTACCTCACAACAAAATCCGATGTCTATAGTTTTGGTGTTCTTCTCTTGGAAATTCTAAGTGGTAGAAAAGCTATCGACATGATGCAATATGAAGAAGGGAATAACATAGTTGAATGGGCAGTGCCTTTGATCAAATCAGGAGATATATCTGCAATTTTGGATCCAATTCTTAAACCACCTCATGATCTTGAAGCATTGAAAAAGATAGCTAATGTAGCTTGTAAATGTGTGAGAATGAGAGGAAAAGATAGACCTTCAATGGACAAAGTAACAACAGCTTTGGAAAGAGGTCTTGCTGTGTTAATGGGCAGTCCATGCATTGATCAACCAATTTTACCTTCTGAGGTTGTTTTAGGAAGTAATAGATTGCACAAGAAACCATCTCAAAGATCTTCAAATATGTCAGTTTCTGAAATTGAGGATCCAAGGTTTGAGCTTAGAGCACCTTCATGGATAACATTCCCTAGTGTCACATCTTCTCAAAGAAGAAAGTCATCATCAATGTCAGAGGCAGATGTTGATGGAAAAGTTGTCGAAGTAAAGAATATGTGCAATGTTGGTGGAGGGAGTAGTGATGTGTTGAGAAGTCTTGAGGAAGAGATTGTACCACCTTCTCCACAAAAGAGGATGTTCTTGGAACATAACTTCTAG 2745 0.388 MGFTERHFLIYGLNILFELVVLISNLWCQVYSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYETPTHFSFHGLTAGDGFVCGLLMDSNQPYCWGNSNYIEMGVPQPMIKEARYLEISAGDYHVCGVRKPWSENVSLVDCWGYNMTKSYVFDGMVHSISAGSEFNCGLFSNNRSVFCWGDETNSKVISFIPSKLKFKKISAGGYHVCGILEGVNSRTFCWGRSLNMEEQISVRHVGGEGNVDLPPNDTMISVVGGRFHACGIKSYDHGVICWGFMIKPSTSVPSEIKVYEIAAGDYFTCGVVDEKKSLMPVCWGVGFPTSLPLAVSPGICKPFPCPSGFYEFEQKGLCKFPNSGVCMPCSGDCPVEMYQKSGCNLASDRVCEYDCSSCSSPECFLHCSSSYSNVGNKKKNEKIWALQLPVIIAEIGFVVFIVSIASLTSILYVRRRLRDCECPARLEKAKKLSRSSSLQNENRNNRIRPEMEEFKLRKAQRFTYEELQTATCGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSLSSSNNIHKNSNEFHTELDLLSRLNHAHLLNLLGYCEEDGERLLVYEFMANGSLYEHLHGTNQVLKQHLNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMMQYEEGNNIVEWAVPLIKSGDISAILDPILKPPHDLEALKKIANVACKCVRMRGKDRPSMDKVTTALERGLAVLMGSPCIDQPILPSEVVLGSNRLHKKPSQRSSNMSVSEIEDPRFELRAPSWITFPSVTSSQRRKSSSMSEADVDGKVVEVKNMCNVGGGSSDVLRSLEEEIVPPSPQKRMFLEHNF* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1994 914 Pfam Protein tyrosine and serine/threonine kinase 516 791 IPR001245 GO:0004672|GO:0006468
Mtr4g1994 914 Pfam Regulator of chromosome condensation (RCC1) repeat 164 192 - -
Mtr4g1994 914 SUPERFAMILY Protein kinase-like (PK-like) 489 792 IPR011009 -
Mtr4g1994 914 SMART serkin_6 513 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1994 914 SUPERFAMILY RCC1/BLIP-II 32 283 IPR009091 -
Mtr4g1994 914 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 14 914 - -
Mtr4g1994 914 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Mtr4g1994 914 Gene3D - 83 339 IPR009091 -
Mtr4g1994 914 Gene3D Phosphorylase Kinase; domain 1 483 594 - -
Mtr4g1994 914 PANTHER RECEPTOR-LIKE KINASE 14 914 - -
Mtr4g1994 914 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 343 390 IPR001368 GO:0005515
Mtr4g1994 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Mtr4g1994 914 Gene3D Transferase(Phosphotransferase) domain 1 595 798 - -
Mtr4g1994 914 ProSiteProfiles Protein kinase domain profile. 513 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1994 Mtr-Chr4 33515090 33518661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1994 15 914 Receptor kinase-like Gene Family AT3G59420 65.532 0.0 1161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mtr4g1994 PK_Tyr_Ser-Thr 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1994 - - gmx:100797455 1442.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1994 4 33515090 33518661 Mtr2g3434 2 48461598 48465491 PCT