Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1991 ATGGGGAACAAGAAGAAGAAAGGAGGTGGCGGAGGAAGAAGAAACAAAGCAAGAACACCTTCTTCCAAAGACCACCACACTTCTCAATTCCGCAACGATGACGATAACAATGAACAACTCTCCGAAGAAATCACTGCACTGTGTTCAATTTTTCAAGAGGATTGCCAAATTATTCCAAAATCTCCACCTCAAATTGTTATTAAGCTCAGGCCTTACTCGAATGACATGGGTTATGAAGATGTGGATGTTTCCGCTCTTCTTGTTGTCAGGTGCTTGCCTGGGTATCCTTTCAAGTGTCCCAAGTTGCAGATTACTCCCGAGATGGGTTTATCACAAACTGATGCTAATAAACTTTTGTCTCTCCTCCTTGATCAGGCCAATTTAAATGCTAGGGAGGGACGAGTAATGATCTTTAATTTAGTTGAGGCTGCTCAAGAATTTCTGTCTAGAATCGAGCCTATTGCCAAACCAACTGAATCTAAGTTTTCACACTCAACTACAGAGGGCAAAGATGAATTGTGTCCCAAGGATATGGCATCTTCAAATAAGAATAGATCTTTTGTTTATGGTTTCATCGACCTTTTCAGTGGCTATGGAGAGTCCTGGAATTGGGGTTTTGGAATTGATGAACCTGCTGTAAAAATTTCTTCTCTTCCTTCCTCTAAGTTAGATGCCTCCAAACCACGAATAGAAGCTCGGGAAAAAAAATCTGATAGCAAGGAAAACCCGTTCATATTGCAAGAACTTCCTGCCAAATTAGATACTGTCGGAGAAGTTAGTGAAGACAATAACAATAATAGCTCAACTTTGACTCATTCAAGTAGATCTCTGGATGGTTTTGTAGGGGACGACAATGAAGGTGAGAAAGAGTATTTTATTGTGGATGAGTATACAACAGAAGATAACAAAGATATGTCTGACAGTGAGTCTACAGAGTCTCTCTCTTCTGTGTCGCCTCATCACCAAGCATCTCAAACAATAGAAAAGGATCTAATAATGGTTCACATGCTTCGCCTTGTTTGTGCCTCTAAAGGTACCTTGGCTGACTCTTTGCCTCAATTAGCAACAGAGCTGTACAATTTAGGGATATTTTCTGACTCGGCACGTGATATGGCATCAAAACCACTTTCCCTTTTCAACAAAACCTTTGATCACATCTTCAAGAAACACCTGGCATCATCCAGAATATCTCAATTTTGGACACCTTCTTCTGATCTTGGAGGCTCTAATACAGTTCAACACAGTTCTCGATATTTAAATGATTTTGAGGAGCTACGCCCTCTTGGTCATGGTGGTTTTGGTCACGTTGTGTTGTGCAAAAATAAACTCGATGGAAGGCAGTATGCAATGAAGAAAATTCGCCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGGAAGTAGCTACGCTTTCTCGTTTACAACATCAACACGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTGCAGATTCTTATGGTGATCCTGCTGGGGAATCAAGAACTCCAGCGAGCTCTACTTTCAGCTACAAAGCTGCAAGCTCCAATGATGCTATTGGGCTTGAGAATCAGCTTGAATCAACATATCTTTATATACAAATGGAATACTGTCCCAGGACTCTTCGCCAGATGTTTGAATCATATAATCATTTTGACAAAGAATTGGCCTGGCATCTGTTTCGCCAAATAGTAGAAGGTTTGGCACACATACATGGGCAAGGAATAATTCACCGGGACTTAACACCAAGTAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGACTTCGGTCTTGCCAAGTTCTTGAAGTTGGAGCAGCTGGATCAAGATCTAGCCCATCCTGCCGATACAACTGGAGTTTCCATTGATGGCACTGGACAAGTTGGGACATATTTCTATACAGCTCCTGAGATTGAGCAAGGATGGCCTAAGATTGATGAAAAGGCTGACATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCATCCATTTGGGACTGCAATGGAGAGGCACGTTGTTTTATCCGATCTGAAACAGAAAGCGGAGTTTCCACCTTCATGGGTTGCTGAGTTTCCAGAACAAGAATCCTTGCTGCGGCAGTTAATGTCTCCAGGTCCCTCAGATCGCCCGTCTGCAACAGAACTTTTGCAGAATGCATTTCCTCCACGAATGGAGTCTGAATTGTTGGATGATATCCTGCGAACAATGCAGAAATCAGAGGATACAAGCATTTACGATAAAGTTTTAAATGCTATCTTTGATGAAGAGATGTTAAGCACAAAACACATTCGTCAGGTTGGTAGATTGGGGTCAGTTGGAGATAACAATTCATCCATTCAGCACACAGATTTTGTAACCGAGGTCCGAGATGATGTTGTAGATGTCAACAAGGAAATTTTCAGGCAGCATTGTGCTAAACACCTAGAAATATCACCAATGCGATTATTGGATGATTGTCCACAGTTTAACAGAAATGCAGTTAAACTTCTGACCCATGGTGGAGCCATGCTTGAACTTTCCCATGAGCTGCGTTTGCCTTTCGTGAACTGGATTATATCTAACCAGATATCTTCATTCAAACGATATGAGATATCATACGTTTACAGAAGAGCAGTTGGGCATTCATCACCAAACCGTTACCTTCAGGGAGATTTTGACATTATTGGTGGTACTTCAGCATTGACAGAGGCAGAGGTCATAAAGGTCACGAAAGACATAGTCACTTGTTTTTTCCATGAAGACTCGTGTGACATTCATCTAAACCATGCTGACCTCCTGGGTGCAATTTGGTCATGGACTGGAATCAAGGTAGAACATAGACTCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGTCCTCAATCCTCAGAAAGGAAATCAAAATGGGTAGTGATAAGGCGGCAGCTTTTGCAGGAACTGGGTTTAGCTGAAGCTATGGTAAATAGGTTGCAGACTGTAGGTTTGAGATTCTGTGGATCTGCAGGTCAGGCACTTCCCAGACTAAGGGGCGCTCTACCATCTGATAAGCGTACCTTCAAGGCACTTGATGAATTGTCTGAGCTTGCCAGTCTCTTGAGAATTTGGAGGATTGACAAAAATGTATATATAGATGCATTAATGCCGCCAAACGAAAGTTATCACAGAGATTTGTTTTTTCAGATATACTTAAGGAAGGAGAACAGTTCTGGATCACTTTCTGAAGGTGTCTTGCTAGCTGTTGGTGGTAGATATGACTATTTGCTTCATCAGTTGAGGAGTAGTGACTATAAAGGAAATCCTCCAACTGGTGTGGGGACTAGCCTTGCACTAGAGACAATAATTCAGAATTGTCCTGTAGATTTTAAGCATAACCGAAATGAAGCCAGCATCAATATTCTTGTGTGCTCAAGAGGAGGAGGTGGTCTGTTGGTGGAACGCATGGAACTAGTTGCTGAATTATGGCTGGAGAACTTTAAGGCCGAATTTGTTCCTGTCCCTGATCCAAGTCTCACAGAGCAGTATGAGTATGCGAATGAACATGATATCAAATGTCTCGTTATTATTACGGATGCAGATTCAGTTAAGGTTCGACATCTTGAACTTAAGAAGGAGAAAAATGTTGAGCGAGAGAACCTAGTCAAGTTTCTATCGGATGCTATGGCAACGCAATTTAGAAACCCCTCCATATGGATTTAA 3696 0.4164 MGNKKKKGGGGGRRNKARTPSSKDHHTSQFRNDDDNNEQLSEEITALCSIFQEDCQIIPKSPPQIVIKLRPYSNDMGYEDVDVSALLVVRCLPGYPFKCPKLQITPEMGLSQTDANKLLSLLLDQANLNAREGRVMIFNLVEAAQEFLSRIEPIAKPTESKFSHSTTEGKDELCPKDMASSNKNRSFVYGFIDLFSGYGESWNWGFGIDEPAVKISSLPSSKLDASKPRIEAREKKSDSKENPFILQELPAKLDTVGEVSEDNNNNSSTLTHSSRSLDGFVGDDNEGEKEYFIVDEYTTEDNKDMSDSESTESLSSVSPHHQASQTIEKDLIMVHMLRLVCASKGTLADSLPQLATELYNLGIFSDSARDMASKPLSLFNKTFDHIFKKHLASSRISQFWTPSSDLGGSNTVQHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAMKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVADSYGDPAGESRTPASSTFSYKAASSNDAIGLENQLESTYLYIQMEYCPRTLRQMFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDLAHPADTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKAEFPPSWVAEFPEQESLLRQLMSPGPSDRPSATELLQNAFPPRMESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTKHIRQVGRLGSVGDNNSSIQHTDFVTEVRDDVVDVNKEIFRQHCAKHLEISPMRLLDDCPQFNRNAVKLLTHGGAMLELSHELRLPFVNWIISNQISSFKRYEISYVYRRAVGHSSPNRYLQGDFDIIGGTSALTEAEVIKVTKDIVTCFFHEDSCDIHLNHADLLGAIWSWTGIKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELGLAEAMVNRLQTVGLRFCGSAGQALPRLRGALPSDKRTFKALDELSELASLLRIWRIDKNVYIDALMPPNESYHRDLFFQIYLRKENSSGSLSEGVLLAVGGRYDYLLHQLRSSDYKGNPPTGVGTSLALETIIQNCPVDFKHNRNEASINILVCSRGGGGLLVERMELVAELWLENFKAEFVPVPDPSLTEQYEYANEHDIKCLVIITDADSVKVRHLELKKEKNVERENLVKFLSDAMATQFRNPSIWI* 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1991 1231 MobiDBLite consensus disorder prediction 298 322 - -
Mtr4g1991 1231 Gene3D Phosphorylase Kinase; domain 1 409 538 - -
Mtr4g1991 1231 Pfam Histidyl-tRNA synthetase 874 1113 IPR041715 -
Mtr4g1991 1231 PANTHER HISTIDYL-TRNA SYNTHETASE 25 1231 - -
Mtr4g1991 1231 SUPERFAMILY Class II aaRS and biotin synthetases 792 1115 IPR045864 -
Mtr4g1991 1231 Gene3D Transferase(Phosphotransferase) domain 1 541 733 - -
Mtr4g1991 1231 ProSiteProfiles Protein kinase domain profile. 422 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1991 1231 Gene3D Ubiquitin Conjugating Enzyme 30 158 IPR016135 -
Mtr4g1991 1231 MobiDBLite consensus disorder prediction 258 278 - -
Mtr4g1991 1231 MobiDBLite consensus disorder prediction 17 36 - -
Mtr4g1991 1231 MobiDBLite consensus disorder prediction 224 244 - -
Mtr4g1991 1231 MobiDBLite consensus disorder prediction 226 242 - -
Mtr4g1991 1231 SUPERFAMILY Class II aaRS ABD-related 1131 1221 - -
Mtr4g1991 1231 ProSitePatterns Protein kinases ATP-binding region signature. 428 451 IPR017441 GO:0005524
Mtr4g1991 1231 Pfam Anticodon binding domain of tRNAs 1130 1223 IPR024435 -
Mtr4g1991 1231 MobiDBLite consensus disorder prediction 1 36 - -
Mtr4g1991 1231 Gene3D Bira Bifunctional Protein; Domain 2 786 1122 IPR045864 -
Mtr4g1991 1231 ProSiteProfiles RWD domain profile. 42 151 IPR006575 GO:0005515
Mtr4g1991 1231 SUPERFAMILY UBC-like 35 148 IPR016135 -
Mtr4g1991 1231 Gene3D - 1127 1221 IPR036621 -
Mtr4g1991 1231 SMART RWD2001b 42 151 IPR006575 GO:0005515
Mtr4g1991 1231 ProSitePatterns Tyrosine protein kinases specific active-site signature. 577 589 IPR008266 GO:0004672|GO:0006468
Mtr4g1991 1231 SUPERFAMILY Protein kinase-like (PK-like) 418 732 IPR011009 -
Mtr4g1991 1231 Pfam Protein kinase domain 422 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1991 1231 Pfam RWD domain 38 148 IPR006575 GO:0005515
Mtr4g1991 1231 PANTHER EIF-2-ALPHA KINASE GCN2 25 1231 - -
Mtr4g1991 1231 MobiDBLite consensus disorder prediction 258 280 - -
Mtr4g1991 1231 CDD STKc_EIF2AK4_GCN2_rpt2 415 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1991 Mtr-Chr4 33475503 33491999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1991 402 725 MAP Kinase Kinase Kinase AT1G63700 26.048 5.57e-23 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Mtr4g1991 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1991 K16196 - gmx:100797996 2040.77