Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1974 ATGGAGGAAATCAACAACCCAGCTATGAAAGTATCATCATCAATCAGCAGCTGGTTATCTGATTTGGAAATGGACGAATACAATATATTTGCTGAGGAATGCAACCTTAATTTCCTTGATGCTGATGTGGGAGGGTTTCTTTCAAATGACATATCTAATGTATTTCAAGAACAAAACAAACAACAATGTTTATCTTTGGGGTCCACTTTTCATGAAACAATTGATAATAGTGACAAAAACAATGAATCTCTTTCTCCATCTTTTCAGTTTCAAGTTCCATCTTTTGACAACCCCCCAAATTCATCCCCTACTAACTCAAAAGAGAATATTGAAACAATACCATTGTCTCCAACCGATTTGGAAAATATGAATCACTCAACAGAAACCTCAAAAGGGTCATTGGAAAATAAAAAGTTGGAAACAAAAACCTCAAAAAGCAAAAGGCCACGTGCTCATGGTAGAGATCACATCATGGCTGAGAGAAATCGAAGAGAGAAACTCACCCAAAGCTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTTAAGAAGATGGATAAACTATCTGTACTAATTGACACTATCAAATACATGAAAGAGCTTAAAAATCGTTTGGAAGATGTGGAAGAACAAAACAAGAAAACAAAAAAAAAATCATCGACCAAACCATGCCTATGCAGCGATGAAGATTCGTCATCATGTGAGGATAACATTGAATGTGTTGTTGGTTCACCATTTCAAGTGGAAGCAAGAGTGTTAGGAAAACAAGTGCTGATTCGGATCCAATGCAAGGAGCATAAGGGGCTTCTGGTTAAAATTATGGTCGAAATTCAAAAATTTCAACTATTTGTTGTCAATAACAGTGTCTTACCCTTTGGAGATTCTACGCTCGACATTACCATCATTGCTCAGTTGGGTGAAGGGTACAACTTGAGCATAAAGGAACTTGTGAAGAACGTACGCATGGCATTATTGAAGTTTACGTCATCATAA 990 0.3697 MEEINNPAMKVSSSISSWLSDLEMDEYNIFAEECNLNFLDADVGGFLSNDISNVFQEQNKQQCLSLGSTFHETIDNSDKNNESLSPSFQFQVPSFDNPPNSSPTNSKENIETIPLSPTDLENMNHSTETSKGSLENKKLETKTSKSKRPRAHGRDHIMAERNRREKLTQSFIALAALVPNLKKMDKLSVLIDTIKYMKELKNRLEDVEEQNKKTKKKSSTKPCLCSDEDSSSCEDNIECVVGSPFQVEARVLGKQVLIRIQCKEHKGLLVKIMVEIQKFQLFVVNNSVLPFGDSTLDITIIAQLGEGYNLSIKELVKNVRMALLKFTSS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1974 329 MobiDBLite consensus disorder prediction 74 154 - -
Mtr4g1974 329 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 7 327 - -
Mtr4g1974 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 216 IPR036638 GO:0046983
Mtr4g1974 329 Gene3D - 137 218 IPR036638 GO:0046983
Mtr4g1974 329 MobiDBLite consensus disorder prediction 74 130 - -
Mtr4g1974 329 Pfam Helix-loop-helix DNA-binding domain 156 200 IPR011598 GO:0046983
Mtr4g1974 329 PANTHER BHLH TRANSCRIPTION FACTOR 7 327 - -
Mtr4g1974 329 MobiDBLite consensus disorder prediction 206 227 - -
Mtr4g1974 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Mtr4g1974 329 SMART finulus 157 206 IPR011598 GO:0046983
Mtr4g1974 329 Coils Coil 190 217 - -
Mtr4g1974 329 MobiDBLite consensus disorder prediction 206 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1974 Mtr-Chr4 33239041 33241172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1974 93 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.230 3.50e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr4g1974 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1974 - - mtr:MTR_0011s0210 399.053