Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1951 ATGGAACCAGCTCCACCACCATTGGAGCTAGACCTTGACAATCTTAAAGCACTCAAAATCCTAGGAAAAGGTGCCATGGGCACCGTCTTCCTCGTCCACAACCCCACCACCACAACAACCACCACAAACACCACCCTCTTTGCCCTAAAAGTCGTTGACAAAACCTCCATCCACGCCAAACTTGACGCCGAACGCCGCGCCCGATGGGAAATCCAAGTCCTCTCCACCCTCTCCCACCCTTTCCTCCCTTCAATCCTTGGTACATATGAATCCCCACAGTTTCTTGCATGGGCCCTGCCTTATTGTCCCGGTGGTGACCTCAATGTCCTCCGTTACCGTCAAAACGACCGTGTTTTCTCTCCGTCCGTTGTCCGGTTCTACCTAGCTGAAATCCTCTGCGCTCTCGACCACCTTCATTCCATGGGCATTGTTTACCGTGACCTAAAACCAGAAAATGTTCTAATACAACATTCCGGCCACGTCACGTTAACCGATTTCGACCTCTCACGTAAACTTAACCCAAGAACTTTTAAAACCGTTGTTGCAACACCACCACCACCTTTACCAGATTCAAAGTTTCCAGAATCTTCGCGAAAACATCGTCGAAATTTCTCTCGTTGGATACCTCTTCTTCCAACTGAATCTTCTCATAATCATAATCGGCTGCATGCTTTGAATTTGAAGAAGGCTAAGTCAGCACGGGTTAGTCCGGTGAGCCGACGTAAATTGAGTTTCTCAAATGGCGAACGGTCTAACTCATTCGTCGGAACGGAGGAATATGTTTCACCGGAGGTTGTTCGCGGTGACGGACACGAGTTTGCCGTTGATTGGTGGGCATTAGGGATACTTACATACGAAATGCTTTATGGTACAACACCGTTTAAGGGGAAGAATAGGAAAGAAACGTTTAAAAATGTTCTGATGAAGTCGCCGGAGTTCGTCGGAAAAAGGACGGAGTTGACGGATTTGATAGAGAAATTGTTGGAGAAGGATCCTAAGAAGAGATTAGGTTATTCACGTGGTGCTGTTGAGATTAAAGAGCATGCATTTTTCAGAGGAGTACGTTGGGAAATATTGACGGAGGTGATTCGGCCGCCGTTTCTTCCGGCGAGATATGATGATGCCGGGGAATTTTCGTCGGAGAAGTTATCAAATGGGACTGGTGGTGTGGATATTAAGGACTATTTTCAGCGGATGAATTCGCCGTCATTGCCGCCGTCGCCGTCTTGTAAGTTGAGAAAAAATGTTTCCTTAAAGGAATTCTAA 1266 0.4708 MEPAPPPLELDLDNLKALKILGKGAMGTVFLVHNPTTTTTTTNTTLFALKVVDKTSIHAKLDAERRARWEIQVLSTLSHPFLPSILGTYESPQFLAWALPYCPGGDLNVLRYRQNDRVFSPSVVRFYLAEILCALDHLHSMGIVYRDLKPENVLIQHSGHVTLTDFDLSRKLNPRTFKTVVATPPPPLPDSKFPESSRKHRRNFSRWIPLLPTESSHNHNRLHALNLKKAKSARVSPVSRRKLSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFKNVLMKSPEFVGKRTELTDLIEKLLEKDPKKRLGYSRGAVEIKEHAFFRGVRWEILTEVIRPPFLPARYDDAGEFSSEKLSNGTGGVDIKDYFQRMNSPSLPPSPSCKLRKNVSLKEF* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1951 421 SMART serkin_6 15 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1951 421 Gene3D Phosphorylase Kinase; domain 1 371 380 - -
Mtr4g1951 421 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 10 401 - -
Mtr4g1951 421 Pfam Protein kinase domain 246 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1951 421 Pfam Protein kinase domain 17 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1951 421 Gene3D Transferase(Phosphotransferase) domain 1 106 184 - -
Mtr4g1951 421 ProSiteProfiles Protein kinase domain profile. 15 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1951 421 SUPERFAMILY Protein kinase-like (PK-like) 12 380 IPR011009 -
Mtr4g1951 421 PANTHER FLIPPASE KINASE 1-RELATED 10 401 - -
Mtr4g1951 421 ProSitePatterns Protein kinases ATP-binding region signature. 21 50 IPR017441 GO:0005524
Mtr4g1951 421 Gene3D Phosphorylase Kinase; domain 1 15 105 - -
Mtr4g1951 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Mtr4g1951 421 Gene3D Transferase(Phosphotransferase) domain 1 248 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1951 Mtr-Chr4 32813260 32814841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1951 6 410 AGC Kinase Gene Family AT1G51170 58.072 2.36e-162 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr4g1951 Pkinase 7.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1951 - K08286 gmx:100785281 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1951 4 32813260 32814841 Mtr4g1951 4 32813260 32814841 ECH
Mtr2g3405 2 48093696 48095198 Mtr4g1951 4 32813260 32814841 PCT