Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1947 ATGGAACATGAAAAAACTGAATGTCAAGCTCCCCCTGAAGGTCCTATATTGTGCATCAACAACTGTGGATTTTTTGGAAGTGCAGCTACCATGAACATGTGCTCTAAGTGCCACAAAGACATGATGCTGAAACAGGAGCAAGCCCAGCTTGCAGCATCATCCCTTGGAAATATTATGAATGGGTCTACAAGCAACACTGAAAAAGAACCTGTTGTTACTGCCACCAGCGTGGATATCCCAGCCATTTCTGTGGAACCTAAAACTGCCAGCGTGGATATCCCAGCCATTTCCGTGGAACCTGAAACTATCTCTAAGCCTTTTTTATTTGGCTCAGGTTCAGAGGAGAGTGATGATCCAAAGCCGAAGGATGGTCCGAAACGTTGCAGCAACTGCAATAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGCAACCTTTTCTGTGCTGTACATCGCTACTCAGACAAGCACGATTGCCCGTTCGATTACCGCACTTCTGCACGGGATGCCATAGCCAAAGCAAACCCGGTTGTCAAGGCTGAGAAGCTTGATAAGATCTGA 564 0.4645 MEHEKTECQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAQLAASSLGNIMNGSTSNTEKEPVVTATSVDIPAISVEPKTASVDIPAISVEPETISKPFLFGSGSEESDDPKPKDGPKRCSNCNKRVGLTGFNCRCGNLFCAVHRYSDKHDCPFDYRTSARDAIAKANPVVKAEKLDKI* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1947 187 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Mtr4g1947 187 SUPERFAMILY AN1-like Zinc finger 112 182 IPR035896 -
Mtr4g1947 187 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Mtr4g1947 187 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 93 - -
Mtr4g1947 187 PANTHER AN1-TYPE ZINC FINGER PROTEIN 88 187 - -
Mtr4g1947 187 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Mtr4g1947 187 ProSiteProfiles Zinc finger AN1-type profile. 122 168 IPR000058 GO:0008270
Mtr4g1947 187 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Mtr4g1947 187 SMART AN1_Zf_4 128 165 IPR000058 GO:0008270
Mtr4g1947 187 Gene3D - 110 183 IPR035896 -
Mtr4g1947 187 Pfam AN1-like Zinc finger 128 164 IPR000058 GO:0008270
Mtr4g1947 187 MobiDBLite consensus disorder prediction 107 126 - -
Mtr4g1947 187 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 93 - -
Mtr4g1947 187 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 88 187 - -
Mtr4g1947 187 Gene3D - 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1947 Mtr-Chr4 32689706 32692864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1947 4 187 C2H2 Transcription Factor Family AT3G52800 41.489 1.07e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1947 - - gmx:100500070 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1947 4 32689706 32692864 Mtr4g1947 4 32689706 32692864 ECH
Mtr7g2675 7 43479144 43481349 Mtr4g1947 4 32689706 32692864 ECH
Mtr1g1742 1 24643698 24645865 Mtr4g1947 4 32689706 32692864 ECH